Coregonus clupeaformis (lake whitefish): 121533087 Help Entry 121533087         CDS       T08357                                  Name (RefSeq) collagen alpha-1(XVII) chain   KO K07603   collagen type XVII alpha Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:cclu00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     121533087 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen FlgT_N Motif Other DBs NCBI-GeneID:  121533087 NCBI-ProteinID:  XP_045070816 LinkDB All DBs Position Unknown AA seq 1383 aa AA seqDB search MGRCTGPYKGEGTTSSVVSSQKSVSSSSSSGGSVVERKLITQSGGSSSSSYPIKSSCLSS SSGLLSTGVGESTSRAVTGGSSSVLVSSSSGSSSSAAAGASFGASKTSGSLSISGGGLSS SSSSSFFTGSSSGGSNSGFVSSSKGAGGGGEGGGGGSSVTDYSSGSSSGFASSSGTGIGG GGSSRAKMSAGGLGSVTVSTVTKSNYSSLAGVGSGSVKRGGAQGSASSAVSYSPTPTERK SMTTTMTARSVGYEGSSSENSSPEYTRREYAAASTAASAPSRGRTHSRESEIRCRLQSAS PTAKRWTELGDVKRLLKGSRSSSISPPRSPTSTLPIPRKASVETRTMSKSSQSGQYESAT LDSGMPSYVWPGSSAGGYGYHTNAINLSPTSTLQHSPTTLTATGLQNNLALSSTSMNSGL SASSTVYGMQNNLATTTGGILTANGVNAQTVYGVQRNVTSTGVSTTTVAPGSPTSGDVFA KDYKFILLEKENAPVKKETERLIMTKDTGKQFSSAATAIAYSEDSLKKEKKKVSSFEETA TARTTETNAGSLMKVSTKDKATYAEIRKDESGGGLGFWSCCSWWKWLLGLLLGLLLLLGL LFGLIALAEEVKRLKARVDALEQASSSSSAHSSRLSSSSAINIIDPLESAYIDKTSSFSS TTLLRSDNGINLGASAGAGPGTATGPGQDRVALQRAVQQIVRTELQSDTVRATLAHSMKG ARGEPGTKGDQGGPGVKGDNGFPGLPGPPGQMGHSGQEGPRGPKGNAGEAGAEGLPGQRG REGPTGSRGEPGPQGFGEKGDRGSPGEPGGSGPAGTAGPVGPKGSMGAQGATGIPGTPGP QGFRGEAGAPGPKGEKGPAGPPGNKGETGEKGPRGLSGDPGQRGLPGPEGANGSKGPAGA PGADGEKGSRGDKGSDGLPGPRGPAGPPGDTGLPGIPGLQGPPGIPGNPGQSGAKGEAGE PGRVINAAGSSSVAMPGTPGSPGPPGAAGSPGLSGPVGPAGLPGTPGPKGEKGEEGEKGD QGKPGITVQTVETSEKRSPVAGLPGPPGPPGEPGAQGPLGKGLPGPEGPQGEPGVPGVGV PGPQGEKGEPGSFVPNSGTFFAGPPGPAGPTGLPGSPGPQGYQGDPGQPGLPGVPGDPGV GFPGRPGGPGPEGDSGPPGPQGPEGPEGQQGPKGDAGVPGAPGIPGYSSGGSSRSSPGAP GPPGPPGAPGRDGPPGSGAGTPDVRHYITEYLKSDGVREYMSGPPGPPGAPGPPGGGSVE SVDDLVSRVIAYIQSGGIASGVPGPPGPPGAPGGGGISLEDIISLLQREEVRRYVIGPPG PAGPPGIPGIPWRGGYGFNTHEVAGRVLTLMNEQGMVGVLGPPGPPGPPGLPGSYGDISY LLQ NT seq 4150 nt NT seq  +upstreamnt  +downstreamnt atggggcggtgcacaggcccatataagggagagggcaccactagctcagtcgtgtccagc cagaagagtgtgtcgtccagcagttctagcggaggttctgttgtggagaggaagctcatc actcagagcggtggcagcagcagcagtagctatcccataaaatcctcatgtctctcttca agtagtgggctgctctctactggagtaggagagtctaccagtagagccgtcacaggaggc agtagctcagtgctagtatcctcctcatctggtagttcctcctctgctgcagccggggcc tcgtttggggctagcaagaccagcggctccctctccatctctggaggtggtcttagctcc agctccagttccagtttcttcactggttccagttctggtggttccaattctggttttgtt tctagttccaagggagcaggaggaggaggagaaggaggaggaggaggcagttccgtcact gattacagttctggttctagttctggttttgcctctagttctggtaccggaatcggagga gggggttcttctagagccaaaatgtcggccggcggcttgggctctgtgaccgtttccaca gttaccaagtccaactacagttctttggcaggggtggggtcagggagcgtgaagaggggc ggggcacaggggtctgcatcctctgctgtcagctactcccccacccccacagagagaaag agcatgaccaccaccatgaccgcccgctccgtgggctacgaaggaagttccagtgaaaac tcctctccggaatacacaaggagagaatatgctgcagcaagtacagctgccagtgcaccc agcagagggcggacccacagcagagagagtgagatcagatgcagactgcagagtgcctct cccactgccaaaagatggacggagctgggagatgtgaagcgtctgctgaaggggagtcgc tccagcagcatcagcccccctcgctcccccaccagcaccctccctatccccaggaaggcc agcgtggagaccagaaccatgtcaaagagctcccagtcaggccagtatgaaagcgccacc ctggactcaggcatgccttcctacgtgtggccaggctcctcggctggaggctatggttac cacaccaacgccatcaacctgtcccccacctccaccctccaacactcacccaccacactc acagccacagggcttcagaacaacctggccctcagctctacatccatgaactctggactc tccgcctctagcactgtttacggtatgcagaataacctggccaccaccactggtggtatc ctaacagctaacggagtcaacgcacaaacagtctatggtgtgcagagaaatgtcacaagc acaggggtgtccacaaccactgtggcacctggcagtcctaccagtggagatgtcttcgcc aaagactacaagttcatactgctggagaaagagaacgcgccagtcaagaaagagacggag agactcatcatgaccaaagataccggcaaacagttctcctctgctgccactgctattgcc tattctgaggactcactgaagaaggagaagaagaaggtatccagctttgaggagacagct acagccagaaccacagaaactaacgctggatccttgatgaaagtgtcaacgaaagacaag gcaacctatgcagagatacgtaaggacgagtctggaggaggtctgggcttctggtcctgc tgctcctggtggaagtggctgctgggcctcctgctgggtctcctgctcctcctggggctc ctctttggactcatcgccctggccgaagaagtcaaacgtcttaaagctcgtgtggacgcc ttggaacaagcctccagctcttcctcagcccattctagtcgcctctcctcctcctcagcc attaacatcatagaccctctggagtctgcatacatagacaagacctcctctttctcctct accacactgctccgctctgataatggtatcaatctgggagcatcagcaggagcaggtcca ggaacagccactggaccaggccaggaccgtgtagctctgcagagggcagtacagcagata gtcaggacggagctgcagtccgatactgtacgagcaacacttgcacactcaatgaaagga gcaagaggagaacctgggaccaaaggtgaccaaggtggtccaggagtcaaaggtgataat ggattccctggcctaccaggtccaccaggtcagatgggtcacagtggacaggagggcccg aggggacctaaaggaaatgcaggtgaagctggtgcagagggcctcccggggcagaggggc cgagaaggaccaacgggatcacgtggagagcctggtcctcaagggtttggagagaaaggg gacagaggttctcctggtgaacccggaggctccggacctgctggcactgctgggcctgtt ggacctaaagggtcaatgggtgctcagggtgctacaggtatcccaggaactcctggtcca cagggtttccgaggtgaagcaggcgctccaggaccaaaaggcgagaagggaccagctgga cctccaggaaataagggtgagacaggagagaaaggaccccgcggactatcaggtgaccca ggtcaaagaggacttccaggaccagagggagcaaatggatccaaaggacctgcaggagct cccggggctgatggggaaaaaggctctagaggtgacaagggatcagatgggctgccaggt cccagaggaccagcaggacctccaggagatacaggcctcccaggcattcccgggcttcaa ggtccaccaggtataccaggtaatcctggtcagtctggagctaaaggcgaagccggagaa cctggtagagtcatcaatgcagctggttccagttcggtagccatgcccggaactccaggc agccccggaccacctggtgctgccggatcccctggactctcaggtcctgttggccctgct ggtcttcctggaacgcctggtcccaagggagaaaagggagaggaaggagagaagggagac cagggaaagcctggtattactgtacagactgtggaaaccagcgagaaacgttcacctgtg gctggtcttcctggccctccagggcccccaggagaaccaggtgcccagggtcctctaggt aagggtctcccaggtcctgaaggtcctcaaggagagccaggtgtaccaggtgttggcgtg cccggcccccaaggagagaagggagagccaggtagcttcgtgcccaactcaggaaccttc ttcgctgggccaccaggacctgctggcccaactggtcttccgggatcaccaggaccccag ggttaccaaggtgacccaggtcagcccggtttaccaggagttcccggagatcccggagtc ggtttccctggacgacctggaggtccaggaccagaaggggacagtggacctccagggccc caaggtccagagggccctgaggggcagcagggtcccaaaggtgatgctggcgttccaggt gctccaggaatccctggctactccagtggtggatcatccaggagttcccctggagcacca ggcccacctggacctcccggggcccccggccgcgatgggccacctgggtctggggctgga acaccggatgtccgtcattacatcacagaatacctcaagagcgatggtgtcagggagtac atgtcgggtcctccgggtcctcctggcgcaccagggccccctggtggtggatcagtggag tcagtggacgaccttgttagtcgcgtcatcgcatacatccagagtggaggtattgctagt ggggtgcctggacctccaggcccgcctggcgcaccaggcggaggcggtatatcactagaa gacatcatcagccttctacagagggaggaagtgcggcgttacgtcattggtcctcctggc cctgctggacctcctggcatcccagggatcccatggagaggtggctatggctttaacacc catgaggtggctggacgagtcctcactctaatgaatgagcagggtatggtgggtgtgctt ggaccccctggacctcccggcccacctggcctacctgggtcttatggtgacatctcttat ctactgcaaa

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