Coregonus clupeaformis (lake whitefish): 121533124
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Entry
121533124 CDS
T08357
Name
(RefSeq) xylosyltransferase 1-like isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cclu00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cclu01100
Metabolic pathways
Module
cclu_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
121533124
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
121533124
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121533124
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
121533124
Glycosyltransferases [BR:
cclu01003
]
O-Glycan biosynthesis
Glycosaminoglycan
121533124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Methyltransf_33
Motif
Other DBs
NCBI-GeneID:
121533124
NCBI-ProteinID:
XP_041694845
LinkDB
All DBs
Position
20:1564280..1675223
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AA seq
971 aa
AA seq
DB search
MVGGSCARRLARRSRSALIAALTVLLVQTLIVWNFSSLDSGEERENGGGGASNMREKRDR
VGGGGYKGSEYMKRGVQLQHHPPQGKGTVRHIQQPDGYYSHRPKEKVRVDSNNENSVPKD
FENIDNSNFGARSQPQRQPPGGASSNKRREKLQENAHAQQAAWKDNAPILSRSSNEVLQY
GRAVAQNGSLPVGPKAIGAGLAGVGSRNHHTRSSQPQSQGQVQSHPQSQSHPKTQHRHQH
PHQTKKQATAAPLEVVYDQPPKCEISGKEAISALSRAKTKECRQQIAEVYCRHKEGQLMP
EKVTRYCPIEGKANANVAWEEDSSEGPPSAPVRIAFVLVVHGRASRQFQRLFKAIYHTSH
YYYIHIDQRSNYLHRQVQALASQYPNVRVTPWRMATIWGGASLLTMYLRSMADLITMTDW
SWDFFINLSAADYPIRTNSQLVAFLSKYRDMNFIKSHGRDNARFIRKQGLDRLFFECDTH
MWRLGDRKIPEGISVDGGSDWFLLNRAFVEYVIKSQDDLVINMKRFYTYTLLPAESFFHT
VLENSAHCESMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPADFHRFQQTTRPT
FFARKFEASVNQEIVNQLDGYLFGPMPQGTPGLQAYWESAFDEADGVATLSDTQLTHYHA
FARMGLARAAASLQGDPKDDSCRYFPMGHPVSVHLYFQSDQFQGYLVKHHATNLATSKLE
TLETWVMPRKTYKVASPPSTFNRLQFAEIGTEWDAKERMFRNFGGLMGPMDETVGMQRWS
KGPNVTVTVVWIDPTNVIAATYDILIDASAEYTHYRPPLNQPLRPGVWTIRVLHHWSPVA
ETRFLISPLAYMKHQPIRQEDTLKLHNGPAKNSYMEQSFHGLNPVLNIPVHLGQVEQAKR
NAVLTGPALEHWVDGLVGAMWEAGDVCSTSMTGGPGTSCPVMQACAKTPWSSLSPDPKSQ
LVPPHADGHIR
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggttggcggctcgtgtgctcgcaggttggcccgccgctcgcggtccgccttaatagcg
gctctcacagtgctgctggtccaaacgctgatagtgtggaacttcagtagcctcgattcc
ggggaagaacgagaaaacggcggcggtggcgcgtcgaacatgagggagaagagagaccgg
gtcggcggcggtggctacaaaggcagcgagtatatgaagcgcggggttcaactacagcac
catcctccacaagggaaagggacggtacgtcacatacagcagccggatggctactattcc
caccggcccaaggagaaggtcagagtggacagcaacaatgagaactctgtgcccaaagac
tttgagaacatagacaatagtaactttggtgcccgctcgcagccccagcgccagccccca
gggggcgctagtagtaacaaacgcagggagaagctgcaggagaatgcccatgcccaacag
gcagcctggaaggataacgctcccattctcagccggagctccaacgaggtcctccagtat
ggacgagccgtagcccagaatggctcacttcctgtgggcccgaaagcgattggagccggg
ttggcgggggtgggctccaggaaccaccacacccgctcttcacagccacagagccagggt
caggttcagtctcacccccagtcacagtcccaccccaagactcaacatagacaccaacac
ccgcatcaaaccaagaagcaggcgactgcggctccattggaggtcgtctacgaccagccg
ccaaagtgtgagatcagtgggaaggaagccatttcagctctgtctagagccaagaccaag
gagtgccggcagcagatagctgaggtgtactgcagacacaaggagggtcaactgatgcct
gagaaggtcacccgctactgtcccatagagggtaaggccaatgccaacgtggcgtgggag
gaggactcgtcagagggccccccgtcggcccctgtcaggatagccttcgtcctggtggtc
cacggcagagcctcacgacagttccaaagactcttcaaggccatctaccacacctcacac
tactactatatacatatagaccagcgttccaattacctccacagacaggtgcaggccctg
gcctcccagtaccccaacgtgagggtgacgccctggaggatggctaccatctggggcggt
gccagcctgctcacaatgtacctccgtagcatggcagacctcatcaccatgaccgactgg
agctgggacttcttcatcaacctcagcgctgcagactaccccatcaggaccaacagccag
ctggtggccttcctgtccaagtacagagacatgaacttcatcaagtcccacggcagagac
aacgccaggtttatccgcaaacaaggtctggaccggcttttcttcgagtgcgacacccac
atgtggcgactgggcgaccgtaaaatcccagaaggcatttctgtggacggcggttctgat
tggttcctgctcaatcgtgcgttcgtggagtacgttataaaatcccaagacgacctcgtc
atcaacatgaagcgcttctatacctacacactgctgcccgctgagtcgttcttccatacg
gtgctggagaacagtgctcactgtgagagcatggtggacaacaacctgcgcatcactaac
tggaacaggaagctgggctgtaagtgtcagtacaaacacatagtggactggtgcggctgc
tcccccaacgacttcaaacctgccgacttccaccgcttccagcaaacaacccggcctacg
ttcttcgccaggaagtttgaagccagtgttaaccaggagatcgtgaaccaactggatggc
tacctgtttggacctatgccccaggggacccctggcctccaggcctactgggagagtgcg
tttgatgaggcggacggggtcgcgaccctgagcgacacacagctcacacactaccatgcg
tttgctcgtatgggcctggccagagcggcagcctcgctgcaaggagatcctaaggatgac
agctgcaggtatttccccatgggccacccggtgtcggtgcatctctacttccagtcggac
cagttccagggctacctggtcaagcaccacgccaccaacctggcaaccagcaagctggag
accctggagacctgggtaatgcccaggaagacctacaaggtggcctccccgcccagcacc
ttcaacaggctgcagttcgctgagatcggcacagagtgggatgccaaagagcgcatgttc
cgtaacttcggtggtctgatgggtcccatggacgagacggtcgggatgcagcggtggtcc
aagggccccaacgtgacggtcaccgtggtgtggatcgaccccaccaacgtcatcgctgcc
acctacgatatcctgatcgacgccagcgcagagtacacccactacagacccccactgaac
cagcctctcaggcccggggtgtggaccatacgggtgttgcatcactggagccccgtggca
gagacaaggtttctgattagtccgctggcttatatgaagcatcagcctataagacaagag
gacacgctgaagctccacaacggaccagccaagaacagttatatggagcagagcttccac
ggcctaaaccccgtgctcaacatccctgtacacctgggccaggtggagcaggctaagcgc
aacgccgtcctgactggccccgccctggaacactgggtagacggcctggtgggtgcgatg
tgggaggctggggacgtgtgttccacctccatgacagggggacccggaacatcctgcccc
gtcatgcaggcctgcgccaagaccccatggagctcgctcagccccgaccccaagtcccag
ctggtcccgccgcacgccgatgggcacatcaggtag
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