Coregonus clupeaformis (lake whitefish): 121533175
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Entry
121533175 CDS
T08357
Name
(RefSeq) homeobox protein OTX1 B isoform X1
KO
K09326
homeobox protein OTX1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121533175
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121533175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
CPSF73-100_C
Motif
Other DBs
NCBI-GeneID:
121533175
NCBI-ProteinID:
XP_041694910
LinkDB
All DBs
Position
20
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AA seq
390 aa
AA seq
DB search
MRGLSMAQSHTATRRLLGISSRDCNIGGIELFRTDFGFPVSVSSMMSYLKQAPYGMNGMG
LSGTAMDLLHPSVGYPAHPRKQRRERTTFTRTQLDILESLFGKTRYPDIFMREEVALKIN
LPESRVQVWFKNRRAKCRQQAQSGNNAKVRPAKKKSSPTRESTGSESSGQFTPPAVSSTG
SSSSSSSSASSGGSHPSGHGGQGLSSTSTSVTAPVSSIWSPAPISPAPAPPPVPDPAPPT
SASCMQRSVSGTGGTSSYPVSYSQTAAAYGQGYPAPASTGSYFGGVECSSYLAPMHSHHH
PHHPHQLSPMTGSSMSGHPHHHIGQTSGHHHHHHPHHHQAYSGAGLAFNSSDCLDYKEQT
AAASSWKLNFNTTDCLDYKDQASSWRFQVL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagaggattgtcgatggcacagtcacacacagcgacaagaagactgctcgggatttca
tcaagggactgcaacatcgggggaatcgaacttttccgcacggactttggtttccccgtg
tccgtttctagcatgatgtcatacctcaaacaggccccgtacggcatgaacggaatgggg
ctcagcggtacggccatggacctactgcacccatcagtggggtatccagcgcatccgagg
aaacagcggagagagagaacaacttttacacgcactcagctggacattctggagtccctt
ttcggcaagacgcgctacccagacattttcatgcgggaagaagtcgcactgaaaatcaat
ttgcctgagtctagagtacaggtatggttcaagaacaggagagccaagtgccgtcagcag
gcccagagtggaaacaatgctaaagtccggcccgccaagaagaagtcctctccaaccagg
gagagcacaggctcagagagcagtggtcagttcacccctccggcagtgtccagcaccggt
tcttcttcctcctcctcttcctctgcctcatccggtggctcccatccctccggccatgga
ggccaaggcctgagcagcacttctacctccgtcaccgccccagtgtcctccatctggagc
cctgcgcccatctccccggcccccgcaccaccccctgtccccgaccctgctccccccacc
agtgcctcctgcatgcagaggtctgtttcaggtactggaggaacgtcctcctacccggtg
tcttacagccagacagctgcggcctatgggcagggctaccccgccccggcgtcaacgggc
tcctacttcggtggggtggaatgcagctcgtacctggcccccatgcactctcaccaccac
ccccaccatccccaccagctcagccccatgacgggctcctccatgtctggccacccgcac
caccacatagggcagacctcagggcaccaccaccatcaccacccccaccaccaccaggcc
tacagcggggccggcctggccttcaactcctcagactgtctggattacaaagaacaaacg
gccgcagcctcttcatggaaactcaacttcaacaccaccgactgcttggactacaaagac
caggcctcctcctggcggttccaagtcttgtga
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