Coregonus clupeaformis (lake whitefish): 121533211
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Entry
121533211 CDS
T08357
Name
(RefSeq) aspartate aminotransferase, cytoplasmic isoform X1
KO
K14454
aspartate aminotransferase, cytoplasmic [EC:
2.6.1.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00220
Arginine biosynthesis
cclu00250
Alanine, aspartate and glutamate metabolism
cclu00270
Cysteine and methionine metabolism
cclu00330
Arginine and proline metabolism
cclu00350
Tyrosine metabolism
cclu00360
Phenylalanine metabolism
cclu00400
Phenylalanine, tyrosine and tryptophan biosynthesis
cclu01100
Metabolic pathways
cclu01200
Carbon metabolism
cclu01210
2-Oxocarboxylic acid metabolism
cclu01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
121533211
00270 Cysteine and methionine metabolism
121533211
00220 Arginine biosynthesis
121533211
00330 Arginine and proline metabolism
121533211
00350 Tyrosine metabolism
121533211
00360 Phenylalanine metabolism
121533211
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
121533211
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cclu01007
]
121533211
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121533211
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121533211
Enzymes [BR:
cclu01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.1 aspartate transaminase
121533211
Amino acid related enzymes [BR:
cclu01007
]
Aminotransferase (transaminase)
Class I
121533211
Membrane trafficking [BR:
cclu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
121533211
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121533211
Exosomal proteins of other body fluids (saliva and urine)
121533211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
121533211
NCBI-ProteinID:
XP_041694959
LinkDB
All DBs
Position
20:4009181..4018022
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AA seq
410 aa
AA seq
DB search
MSIFAEVPQAPPVAVFKLTADFREDTHAQKVNLGVGAYRTDDCLPWVLPVVKKVEKMIVE
DNSLNHEYLPILGLPELRSAASKVALGDDSPAIKDGRVGAVQALGGTGALRIGAEFLRRW
YNGTNNTATPVYVSAPTWENHNAVFSDAGFKDIRPYHYWDGAKKGLDVTGIMDDLENAPE
HSIFVLHACAHNPTGTDPTPDEWKTIAEVMKRRKLFVFFDSAYQGFASGSLDKDAWAIRY
FVSEGFELLCAQSFSKNFGLYNERVGNLTVVAQDKDNLTRVLSQMEKIVRTTWSNPPSQG
ARIVAITLNNPDLFIEWKGNVKTMADRVLLMRDQLKAKLIALGTPGTWDHITQQIGMFSF
TGLNPKQVEYMIKEKHVYLMASGRINMCGLTSKNIDYVAESIHETVSKVQ
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtctatattcgccgaagtacctcaagcccctccggtggccgtttttaaactgactgcc
gatttcagagaggacactcacgcgcagaaggtgaatttgggagtcggagcctaccgtaca
gatgactgtctaccatgggtcctgcccgtagtgaagaaggtagagaagatgatagtggag
gacaacagtctgaaccacgagtatcttcccatcctgggtctccctgagctccgctctgct
gcctccaaggtggccctgggagatgacagccccgccatcaaggacgggagggtgggagcg
gtccaggcgttgggaggtaccggtgcgttgaggatcggggcagagtttctgaggcgctgg
tacaacggcaccaacaacacggccacgcccgtctacgtctccgcgccaacctgggagaac
cacaatgcagtgttttctgatgctgggtttaaagatatccgcccctaccactactgggac
ggagcaaagaaaggcctggatgtgactggtataatggacgacctggagaacgctccagaa
cactctatctttgtgctccatgcctgcgcacacaaccccacagggaccgacccaacacct
gacgaatggaagactatcgctgaggtcatgaagaggaggaagctgtttgtgttctttgac
tcagcctaccagggctttgcatcaggcagtctggataaagatgcctgggccatacgctac
tttgtctctgaaggatttgagctgctctgtgcccagtccttctccaagaactttggcctc
tacaatgagcgtgttggtaacctgacagtagttgcccaggataaagacaacctgacccgt
gttctgtctcagatggagaagatcgtcaggaccacctggtccaaccctccctctcagggg
gcgcgcatcgtagccatcacactcaacaaccccgatctattcatagaatggaagggtaat
gtaaagaccatggctgaccgtgtattgttgatgagagaccagttgaaggctaagctcatt
gctctggggacgcctggcacctgggaccacatcacacagcagatcggcatgttcagcttc
accggactcaaccctaagcaggtggagtacatgattaaggagaagcacgtgtacctgatg
gccagcggtcgtatcaacatgtgtggcctcacctccaagaacatcgactatgtcgcagag
tccatccatgagacagtctccaaggtccagtaa
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