Coregonus clupeaformis (lake whitefish): 121533336
Help
Entry
121533336 CDS
T08357
Name
(RefSeq) histone H2A deubiquitinase MYSM1-like isoform X1
KO
K11865
histone H2A deubiquitinase [EC:3.4.19.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121533336
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121533336
Peptidases and inhibitors [BR:
cclu01002
]
Metallo peptidases
Family M67
121533336
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
121533336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
JAB
Prok-JAB
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
121533336
NCBI-ProteinID:
XP_041695105
LinkDB
All DBs
Position
20:complement(37236112..37253592)
Genome browser
AA seq
870 aa
AA seq
DB search
MADELDVDIEGDEYDAKLGGFGDGAALLQDQYLQSAWKTNTGVLPWELDSSISAENREVI
ENMLLEEQYYLTGKELPKSVWANSPNCKPKPKVKKSPAKPSGSGSSTATRWSQQEKELFE
TGLAQFGRRWTKISKLVGSRTVLQVKSYARQYFKHKAKSEGNAIAVATPTAPVVLGQVTE
TGSTVSTSGLSVPTHLSALTNAVRIERLGDEEEEEVDITDDFSDEGGSGEGNGGERRIEG
IGEDLQAGVRTETREPGAPEELDNHGETHQVQPNQTHPRLGETDQEQPNCSPPSPLTAPC
PAEQAPSGQCEGGTAEPLRESGEETGGSGWQEAGEEQGEESEEEEEELTAPEQEVELDLA
TITEEEKQAIPEFFEGRPSKTPERYLRIRNYMLDQWLKSKPRYLNKTSVRPGLKNCGDVN
CIGRIHTYLELIGGINFNCDQAVYNRPRVVDRSKPRESRDTLEYQLAQRLQSMRTRKRRV
RDVWGNWRDAKDLEGQTYEHLSAEELALRREMRRPHKPCKVSRHRGLLDPFQLIPCREFG
KERQEPFQVIVCAEALLIMDMHAHVSMGEVIGLLGGAYSEVDKVLKIVAAEPCNSVSTGL
QCEMDPLSQTQACELLSSLGLAVVGWYHSHPTFHPNPSLRDIHTQDQFQSYFSRGGAPFI
GMIVSPFDPANPSPRSQTTCLMVREDQGPGPQKLPYRFDYQCSQQQPDWSQLMRRAEWII
HKYKHAHGSVQMDRLFRRDSHLTCLEKMMSSLGRYLEPLLEEEGDPFLSQIHTLFLSHFV
TEKPRDQDEGETSDSSEPINTHAFPFAQPINVRGTDDTGTQENWENESISPIDNIETPSI
ENTNSHTANQENLHPIQFGSVLLTGHDYLF
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgagctggatgttgatatcgaaggagacgaatatgatgctaaattggggggc
tttggtgacggagcagcgctactccaggaccagtacctgcagtcagcatggaagaccaat
actggggtcttgccgtgggaactagacagctctatcagtgcagagaacagagaggtgatc
gagaacatgctgctggaagaacagtattatttgacaggtaaagagctgcccaagagtgtg
tgggccaactcacctaactgcaagcctaaacccaaagtgaagaagtctcctgccaagcct
tcaggttcaggctcctctacagccactcgctggtctcagcaggagaaggagctgtttgag
acaggactggctcagtttggccgtaggtggactaagatctccaagctggtaggcagtcgg
accgttctacaggtgaagagctacgccagacagtacttcaaacacaaggctaaatcagag
ggcaatgctattgcagtggcgacccctacagccccggtggttttaggccaggtcacagag
acagggtcaacagtgtccacctctggcctgtctgtccccacccacctgtcagctctgact
aacgctgtccggatagagagactgggggacgaagaggaggaggaggtggacatcactgac
gacttcagcgatgagggtgggagtggagaaggaaatggaggagaaagaaggattgagggg
attggcgaggacctccaggcaggagttaggactgagacacgtgagcctggagcgccagag
gagctggacaaccatggagagacccaccaggtgcaacccaaccagacacaccccaggctg
ggagagactgatcaggagcaacctaactgtagccctccatctcccctcacagccccctgc
ccagcagagcaggcccccagtggacagtgtgaggggggaactgctgagcccctgagggag
tctggagaggagacaggggggtctgggtggcaagaagcaggggaggaacaaggggaggag
tctgaagaggaagaggaggagcttacagcccccgagcaggaagtggagctggacctggca
accatcacagaggaggagaaacaagctatcccagaattctttgagggacggccatccaaa
accccagagagatacctgaggatcaggaactacatgctggaccaatggttgaagagtaag
cccaggtacttgaacaagacgtcagtgcgtcctggtctgaagaactgtggagatgtcaac
tgtatcggcagaatacacacctacctggagctgatagggggcatcaacttcaactgtgat
caggcagtgtataaccgtcccagggtggtggatcgttctaaacccagagagagcagagac
actctggaataccagctggcccaaagactacagagcatgcgaaccaggaagcgtcgtgtg
agggatgtgtgggggaactggcgtgacgctaaagacctggagggacagacatatgagcac
ctgagtgcagaggagctagccctgaggagagagatgaggagaccgcataaaccatgtaag
gtctccaggcacagagggttgctggatccgttccagctgattccgtgtcgtgagtttgga
aaggaaagacaggagcccttccaggtgatagtatgtgccgaggctctcctcatcatggac
atgcatgcccatgtgtcgatgggtgaggtcatcgggctcctgggaggagcctacagcgag
gtggacaaggtcctgaagattgttgcagcggagccgtgtaacagtgtgagtacaggtctg
cagtgtgagatggaccctttgtctcagactcaggcctgtgagctgctgtctagcctgggc
ttggctgtagtgggatggtaccactctcaccccaccttccaccctaacccctctctacgg
gatatacacacacaggaccagttccagagttatttctctcgaggcggagccccctttatt
gggatgattgtgagtccgtttgaccctgctaacccctccccccgctcccagaccacctgc
ctgatggtcagagaggaccaaggacctggaccacagaagctgccctacaggtttgactac
cagtgttcccagcagcagcctgactggagccagctgatgaggagggcggagtggatcatc
cacaaatataaacacgcccatggcagtgtccagatggacaggctgttccgcagggactct
catctcacctgtctggagaagatgatgtcatctttagggaggtatctggagcccctgcta
gaggaggagggagaccccttcctctcccagatccacactctcttcctgtcacactttgtt
accgagaaacccagagaccaggatgagggtgaaacctctgactcctcagagccaatcaac
actcatgccttccccttcgctcagccaatcaacgtccgaggaacagacgacacaggaaca
caggaaaactgggagaatgaatcgatctcgccaattgataatatagaaacgcctagtata
gaaaatactaactcacacacagctaatcaagagaatttacatccaatacagtttggttct
gtgttgttgactggtcatgattatctattctga
DBGET
integrated database retrieval system
