Coregonus clupeaformis (lake whitefish): 121533360
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Entry
121533360 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121533360
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121533360
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121533360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_2
zf-RING_5
zf-RING_2
Prok-RING_4
TRAF3_RING
DUF1232
Sina_RING
Motif
Other DBs
NCBI-GeneID:
121533360
NCBI-ProteinID:
XP_041695154
LinkDB
All DBs
Position
20:complement(38356011..38378693)
Genome browser
AA seq
245 aa
AA seq
DB search
MNQTMHTSHSSHPRCDPLPEVTVGQGHLGSSSEHTQDRTSLKHVTYSKNSSQICPSAGHR
DWLCPVCLQTASFPVQTNCGHLFCAPCLISYWRHGSWLDAISCPLCRQKVRVMYRLFSEG
WSDRKEREVLGEITDYNKRYSGAPRKVTDYLCDTPLFLQLLVRRLVTMGGLVCLFFLRVA
LCCLGTVVSFSTPPLDAPPSLSGLLGVLDDLVVVFLLLICVININQQMAPDSGNSSEHTG
GRPVQ
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaccatgcacacctcacacagctctcatcccagatgtgaccctctccctgag
gtcacagtgggtcagggtcacctaggatcatcctcagaacacacacaggaccgaacatcc
ctcaaacatgtgacctacagcaagaactcctctcagatctgtccatccgcgggccacaga
gactggctctgccctgtgtgtctacaaactgccagcttccccgtacagaccaactgtggc
catctcttctgtgctccctgtctgatctcttactggagacatgggtcctggctggatgcc
ataagctgccctctgtgtagacaaaaggtcagggtcatgtatcgtctgttcagtgagggt
tggtcagacagaaaagagagggaggttctgggagaaatcacagactacaacaaacgctac
tcaggagcccctcgaaaggtgacagactacctgtgtgacacgcccctgttcctgcagctg
ctagtccgtcgcctggtcaccatggggggcctagtgtgtctcttcttcctccgggtggcg
ctttgctgtctggggactgtggtgtccttctccacgccccccctggatgctccaccctcc
ctgtctggcctcctgggggtcctggatgacctggtggtggtcttcctgctgctcatctgt
gttatcaacatcaaccagcagatggcaccagatagtgggaactcatcagagcacacaggg
ggtaggcctgttcagtaa
DBGET
integrated database retrieval system
