Coregonus clupeaformis (lake whitefish): 121533378
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Entry
121533378 CDS
T08357
Symbol
si:ch211-247n2.1
Name
(RefSeq) calcium-activated potassium channel subunit beta-2 isoform X1
KO
K04938
potassium large conductance calcium-activated channel subfamily M beta member 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
121533378 (si:ch211-247n2.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121533378 (si:ch211-247n2.1)
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121533378 (si:ch211-247n2.1)
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Gene cluster
GFIT
Motif
Pfam:
CaKB
KcnmB2_inactiv
Motif
Other DBs
NCBI-GeneID:
121533378
NCBI-ProteinID:
XP_041695196
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Position
20:complement(38816651..38839664)
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AA seq
267 aa
AA seq
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MKQDSYARRHRGRVGWSQTPSVSGGGHRVSSGRMFLWAGSKGAQGSGGERRTIYQKVREY
DVLDKRKTVTALKAGEDRAILLGLSMILFSVMMYFVLGITMVRSYSDSVWTEESSCTVLN
STIVAEINCTYSCGSECWKSSKYPCLQVFVSLNTSGKVVRLSHNEEAQDTSPECFYVPKC
RKDYNAMYTVIMNISERLKTQQLVLCYTDPGEQQDSALLTRIYGRVAVFHSLFWPTCTLI
GGTIIIAMVKLTQYLSIMCEQVGRIKR
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagacagttatgccagacgacaccgagggagagtggggtggtctcagacgccc
tctgtgagtggtggtgggcacagagtgtcctcagggaggatgttcctctgggcgggaagt
aaaggagctcagggatcaggaggtgagagaaggactatttatcagaaggtccgggagtat
gacgtgctagacaaaaggaagacagtgacagcgctgaaggctggggaggacagagctatt
ctcctcggactcagcatgatcctcttctctgtgatgatgtactttgtgctgggcatcacc
atggtgcgctcctactcagacagtgtgtggacggaggaatccagctgcactgtgctcaac
tccaccatcgtggcggagattaactgtacctacagctgcggctctgagtgctggaaaagc
tccaagtacccgtgcctacaggtgtttgtcagtctcaacacatccgggaaggttgtcaga
ctctcccacaacgaggaggcacaggataccagcccagagtgcttctatgtgcccaaatgt
cggaaggactacaacgcgatgtacaccgtaatcatgaacatctcggagcgtctgaaaaca
cagcagctggtgttgtgttacacggacccaggtgaacagcaggacagtgctctactgaca
cgcatctatggccgagtggcagtgttccactcactcttctggcccacctgcaccctcatt
ggtggaaccatcatcatcgccatggtgaagctcacccagtacctgtccatcatgtgtgaa
caggtgggcaggatcaaaaggtga
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