KEGG   Coregonus clupeaformis (lake whitefish): 121533382
Entry
121533382         CDS       T08357                                 
Symbol
nlgn1
Name
(RefSeq) neuroligin-1 isoform X1
  KO
K07378  neuroligin
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    121533382 (nlgn1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121533382 (nlgn1)
Membrane trafficking [BR:cclu04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    121533382 (nlgn1)
SSDB
Motif
Pfam: COesterase Abhydrolase_3 BD-FAE
Other DBs
NCBI-GeneID: 121533382
NCBI-ProteinID: XP_041695205
LinkDB
Position
20:complement(39488378..39768889)
AA seq 870 aa
MPLQRPGRLRLHPAWRAMQPRLGVGLGLGLDLTFLLWILSLAQQALVTASQKLDETDPVV
TTVYGKLRGVKKELNNEILGPVIQFLGVPYAAPPTGERRFQPPEPPISWPEVRNATQFGP
VCPQTIVEGRLPDVMLPVWFTNNLEIVSSYVQDQSEDCLFLNIYVPTEDVKRISKECARK
PGKKICRQGGPLTKKHNDDLGDNDGAEDEDIRESGSPKPVMVFIHGGSYMEGTGNMFDGS
ILASYGNVIVITVNYRLGVLGFLSTGDQASKGNYGLLDLIQALRWTSENIAFFGGDPLRI
TVFGSGAGASCVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQPAKYARM
LAKKVGCNLKDTVDLVECLQKKHYKELVDQDIQPARYHIAFGPVIDGDVIPDDPQILMEQ
GEFLNYDIMLGVNQGEGLKFVELIVDHENGVQANDFDYAVSSFVDDLYGYPEGKDILRET
IKFMYTDWADRHNPETRRKTLLALFTDHQWVAPAVATADLHSSFGSPTYFYAFYHHCQTD
QVPPWADASHGDEIPYVFGLPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQP
VPQDTKFIHTKPNRFEEVAWTRYNQKDQLYLHIGLKPRVKEHYRANKVNLWLELVPHLHS
LNEVTQIISTTTKVPPPEVTPRTPKKIPVNTKRPNPTPFPTETQDSQNQPFLVDQRDYST
ELSVTIAVGASLLFLNILAFAALYYKKDKRRHDVHRRCSPQRNTTNDLAHTQEEEIMSLQ
MKHTDLDHECDAMHPHKVVLRTACPPDYTLAMRRSPDDIPLMTPNTITMIPNTMQGRQSL
HNFNTFPSSGQNSTLPHTLPHPHSHSTTRV
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgcccctgcagaggcctggccgtctgaggctgcaccctgcctggagggccatgcagccc
cggctgggcgtaggcctgggtctgggcctggacctcaccttcctgctgtggatactgagc
ctagcacagcaggccctggtcacggcctctcagaaactggacgaaacggaccctgtggtc
accaccgtctacggcaaactgaggggcgtcaagaaggagctcaacaacgagatcctggga
cccgtcattcagttcctgggggtaccttatgccgcaccccccacgggcgagaggcgcttc
cagcccccggagccgcccatctcgtggccggaggtccgcaacgccactcagtttggcccg
gtctgcccccagaccatcgtggaggggcgcctgccggacgtcatgctgcctgtgtggttc
actaacaacctggagatagtgtcttcttacgtacaggaccagagcgaggactgccttttc
ttaaacatttatgtccccactgaggatgtaaaaagaatatccaaggaatgtgccaggaaa
ccgggcaagaaaatatgtagacaaggaggtccccttacaaagaaacacaatgatgattta
ggtgataatgacggggcagaggatgaagacatccgtgaaagcggtagccccaagccagtg
atggtatttatccatgggggatcctacatggagggcactgggaatatgtttgacggcagc
atcttggcaagttacggcaatgttatcgtcatcacagtgaactaccggcttggagtatta
ggtttcttaagcacaggggaccaagcttccaagggaaactacggactccttgatctgatc
caagctctgcgctggactagcgagaatattgctttttttggtggtgaccctttacgaata
actgtttttggatcaggggctggcgcctcctgtgtcaacctcctgaccctgtcccattat
tctgaaggtaaccgttggagcaattcaaccaaaggacttttccagagagctatagcacag
agtggcactgcgttgtccagctgggccgtcagcttccagcctgctaagtatgctcgcatg
ttggccaagaaggtgggctgcaacctgaaagacacagtggacctggtggagtgtctgcag
aagaagcactacaaggagctggtggatcaggacatccagcctgcacggtaccacatcgcc
ttcgggcctgttatcgacggtgacgtcatcccagacgacccccagatcctcatggagcag
ggtgagttcctcaactatgacatcatgctgggcgtcaaccagggcgaaggcctgaagttc
gtggagctcatcgtagaccatgagaacggcgtccaggccaatgattttgactacgccgtg
tccagcttcgtggacgacctgtacggttacccggagggaaaggacattctgcgggagacc
ataaagttcatgtacacggactgggctgataggcacaacccagagaccaggaggaagacc
ctactagccctgttcactgatcaccagtgggtggctccggccgtggccacagcagacctc
cactccagctttgggtcgccaacctacttctatgccttctaccaccactgccagacagac
caggtgcccccctgggcagacgcttcccacggcgatgagatcccttacgtgtttggcctg
cccatgattggccccacagagctgttcccttgtaacttctccaagaacgacgtcatgctc
agcgctgtggtgatgacctactggactaattttgccaaaactggtgaccccaaccagccg
gtcccccaggataccaagttcatccacaccaagcctaaccgtttcgaggaggtggcgtgg
acgcgctacaaccagaaggaccagctgtacctccacatcggcctgaagccccgagtcaag
gagcactaccgggccaacaaggtcaacctgtggctggagctggtgccacacctccacagc
ctgaatgaggtcacccagatcatctccaccaccaccaaggtcccaccaccagaggtcacc
cccaggacaccaaagaagatccctgtcaacaccaagaggcctaaccccacgcccttcccc
accgagacccaggacagtcagaaccagcccttcctggtggaccagagggactactccaca
gaactgagcgtcaccatcgccgtgggcgcctcgctgctcttcctcaacatcctggccttt
gcagcgctctactacaagaaggacaagcggcggcatgacgttcaccggcgctgcagcccc
cagcgcaacacgaccaacgacctggcgcacacgcaggaggaggagataatgtccctgcag
atgaagcacacggacctggaccacgagtgcgatgccatgcacccacacaaggtggttctg
agaactgcctgcccgccagactacacgctagccatgcgacgctctcctgacgacatcccc
ctcatgaccccaaacaccatcaccatgatccccaacaccatgcagggccgccagtccttg
cacaacttcaacaccttccccagtagtggacagaacagcaccctgcctcacaccctgcct
cacccgcactcacactccaccaccagggtatag

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