Coregonus clupeaformis (lake whitefish): 121533382
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Entry
121533382 CDS
T08357
Symbol
nlgn1
Name
(RefSeq) neuroligin-1 isoform X1
KO
K07378
neuroligin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121533382 (nlgn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121533382 (nlgn1)
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
121533382 (nlgn1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
COesterase
Abhydrolase_3
BD-FAE
Motif
Other DBs
NCBI-GeneID:
121533382
NCBI-ProteinID:
XP_041695205
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Position
20:complement(39488378..39768889)
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AA seq
870 aa
AA seq
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MPLQRPGRLRLHPAWRAMQPRLGVGLGLGLDLTFLLWILSLAQQALVTASQKLDETDPVV
TTVYGKLRGVKKELNNEILGPVIQFLGVPYAAPPTGERRFQPPEPPISWPEVRNATQFGP
VCPQTIVEGRLPDVMLPVWFTNNLEIVSSYVQDQSEDCLFLNIYVPTEDVKRISKECARK
PGKKICRQGGPLTKKHNDDLGDNDGAEDEDIRESGSPKPVMVFIHGGSYMEGTGNMFDGS
ILASYGNVIVITVNYRLGVLGFLSTGDQASKGNYGLLDLIQALRWTSENIAFFGGDPLRI
TVFGSGAGASCVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQPAKYARM
LAKKVGCNLKDTVDLVECLQKKHYKELVDQDIQPARYHIAFGPVIDGDVIPDDPQILMEQ
GEFLNYDIMLGVNQGEGLKFVELIVDHENGVQANDFDYAVSSFVDDLYGYPEGKDILRET
IKFMYTDWADRHNPETRRKTLLALFTDHQWVAPAVATADLHSSFGSPTYFYAFYHHCQTD
QVPPWADASHGDEIPYVFGLPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQP
VPQDTKFIHTKPNRFEEVAWTRYNQKDQLYLHIGLKPRVKEHYRANKVNLWLELVPHLHS
LNEVTQIISTTTKVPPPEVTPRTPKKIPVNTKRPNPTPFPTETQDSQNQPFLVDQRDYST
ELSVTIAVGASLLFLNILAFAALYYKKDKRRHDVHRRCSPQRNTTNDLAHTQEEEIMSLQ
MKHTDLDHECDAMHPHKVVLRTACPPDYTLAMRRSPDDIPLMTPNTITMIPNTMQGRQSL
HNFNTFPSSGQNSTLPHTLPHPHSHSTTRV
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgcagaggcctggccgtctgaggctgcaccctgcctggagggccatgcagccc
cggctgggcgtaggcctgggtctgggcctggacctcaccttcctgctgtggatactgagc
ctagcacagcaggccctggtcacggcctctcagaaactggacgaaacggaccctgtggtc
accaccgtctacggcaaactgaggggcgtcaagaaggagctcaacaacgagatcctggga
cccgtcattcagttcctgggggtaccttatgccgcaccccccacgggcgagaggcgcttc
cagcccccggagccgcccatctcgtggccggaggtccgcaacgccactcagtttggcccg
gtctgcccccagaccatcgtggaggggcgcctgccggacgtcatgctgcctgtgtggttc
actaacaacctggagatagtgtcttcttacgtacaggaccagagcgaggactgccttttc
ttaaacatttatgtccccactgaggatgtaaaaagaatatccaaggaatgtgccaggaaa
ccgggcaagaaaatatgtagacaaggaggtccccttacaaagaaacacaatgatgattta
ggtgataatgacggggcagaggatgaagacatccgtgaaagcggtagccccaagccagtg
atggtatttatccatgggggatcctacatggagggcactgggaatatgtttgacggcagc
atcttggcaagttacggcaatgttatcgtcatcacagtgaactaccggcttggagtatta
ggtttcttaagcacaggggaccaagcttccaagggaaactacggactccttgatctgatc
caagctctgcgctggactagcgagaatattgctttttttggtggtgaccctttacgaata
actgtttttggatcaggggctggcgcctcctgtgtcaacctcctgaccctgtcccattat
tctgaaggtaaccgttggagcaattcaaccaaaggacttttccagagagctatagcacag
agtggcactgcgttgtccagctgggccgtcagcttccagcctgctaagtatgctcgcatg
ttggccaagaaggtgggctgcaacctgaaagacacagtggacctggtggagtgtctgcag
aagaagcactacaaggagctggtggatcaggacatccagcctgcacggtaccacatcgcc
ttcgggcctgttatcgacggtgacgtcatcccagacgacccccagatcctcatggagcag
ggtgagttcctcaactatgacatcatgctgggcgtcaaccagggcgaaggcctgaagttc
gtggagctcatcgtagaccatgagaacggcgtccaggccaatgattttgactacgccgtg
tccagcttcgtggacgacctgtacggttacccggagggaaaggacattctgcgggagacc
ataaagttcatgtacacggactgggctgataggcacaacccagagaccaggaggaagacc
ctactagccctgttcactgatcaccagtgggtggctccggccgtggccacagcagacctc
cactccagctttgggtcgccaacctacttctatgccttctaccaccactgccagacagac
caggtgcccccctgggcagacgcttcccacggcgatgagatcccttacgtgtttggcctg
cccatgattggccccacagagctgttcccttgtaacttctccaagaacgacgtcatgctc
agcgctgtggtgatgacctactggactaattttgccaaaactggtgaccccaaccagccg
gtcccccaggataccaagttcatccacaccaagcctaaccgtttcgaggaggtggcgtgg
acgcgctacaaccagaaggaccagctgtacctccacatcggcctgaagccccgagtcaag
gagcactaccgggccaacaaggtcaacctgtggctggagctggtgccacacctccacagc
ctgaatgaggtcacccagatcatctccaccaccaccaaggtcccaccaccagaggtcacc
cccaggacaccaaagaagatccctgtcaacaccaagaggcctaaccccacgcccttcccc
accgagacccaggacagtcagaaccagcccttcctggtggaccagagggactactccaca
gaactgagcgtcaccatcgccgtgggcgcctcgctgctcttcctcaacatcctggccttt
gcagcgctctactacaagaaggacaagcggcggcatgacgttcaccggcgctgcagcccc
cagcgcaacacgaccaacgacctggcgcacacgcaggaggaggagataatgtccctgcag
atgaagcacacggacctggaccacgagtgcgatgccatgcacccacacaaggtggttctg
agaactgcctgcccgccagactacacgctagccatgcgacgctctcctgacgacatcccc
ctcatgaccccaaacaccatcaccatgatccccaacaccatgcagggccgccagtccttg
cacaacttcaacaccttccccagtagtggacagaacagcaccctgcctcacaccctgcct
cacccgcactcacactccaccaccagggtatag
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