Coregonus clupeaformis (lake whitefish): 121533480
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Entry
121533480 CDS
T08357
Name
(RefSeq) procollagen galactosyltransferase 2-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00310
Lysine degradation
cclu00514
Other types of O-glycan biosynthesis
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121533480
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
121533480
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121533480
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
121533480
Glycosyltransferases [BR:
cclu01003
]
O-Glycan biosynthesis
O-linked Gal type
121533480
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Ortholog
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GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
121533480
NCBI-ProteinID:
XP_041695385
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All DBs
Position
20:44316478..44354006
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AA seq
615 aa
AA seq
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MMPAVGAGLLCALLVALMPGGMSDLVTLVQDPVRPESSLLMPKIMIAILARNAAHSLPHY
LGCIDRLDYPKERIAIWAATDHSVDNSTAMLREWLKQAQDQYHYVEWRPMEEPKSYTDEW
GPKHWPPSRFNHVMKLRQAALKAARERWADYILFADSDNLLTNPKILNLLMAENLTLVAP
MLESRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCFAVPMVHSTFLLDLRRDASGEL
AFYPPHPDYSWAFDDIMVFSFSARQADVQMYVCNREHYGFLPVPLKASQNVDDEKESFTH
TIAEAMIDHNIAPSEYLYNPQMPQDKMGFDEIFLINLKRRLDRRQRMLSTMASLGLQATL
TDAVDGKALNTSQLQALGIEMIPGYKDPYSGRVLTRGEIGCFLSHHSTWVQMAERGLSKV
LVLEDDVRFEPRFKRRMITIMEEVEKALLDWDLIYVGRKRMQVRQPERSVEGVNNLVEAD
YSYWTLGYALSAQGARKLLAAQAFSKMLPVDEFLPVMFNKHPNSDFMSHFEPRDLKAFSV
EPLLLYPTHYTGEPGYVSDTETSTIWDDEATATDWDRLHEHTRKTEQQGRIHTVAQNSVT
GDSPPPAARSTRDEL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgatgccggcggttggagccggactgctctgcgcgctgcttgtcgccctcatgccgggt
ggcatgtcggacttggtgactctggtgcaggacccggtccgacctgaatcgtcactgctg
atgccaaaaatcatgatcgccattctggctcgcaacgcagcacacagcctgccgcactac
ctgggctgcatcgacaggctagactacccgaaggagcggatagctatctgggcagcgaca
gaccacagtgtggacaacagcacagccatgctgagggagtggctgaagcaggcccaggac
cagtaccactatgtggagtggagacctatggaggagcccaagtcctatactgatgagtgg
gggcccaagcactggcctccgtcccgattcaaccatgtgatgaaactgaggcaggctgct
cttaaagcagcacgggaacgctgggcagattacatactgtttgcagacagtgataacctg
ctgaccaacccaaagattctcaacctgctcatggctgagaacctgactctggtggctccc
atgctggagtcacgctctctctactctaacttctggtgtggcatcaccccacagggttac
tacaaacgtacccctgactaccagccaatcagggagtggaagcgtctgggttgctttgct
gtacccatggtgcactctaccttcctgctggacctgaggcgtgacgccagcggggagctg
gccttctacccccctcaccctgactacagctgggcctttgatgacatcatggtgttctcc
ttctctgcccggcaggcagatgtgcagatgtacgtgtgtaacagagagcactatggcttc
ctgccggttcctctgaaggcctcgcagaatgttgacgatgagaaggagagcttcacacac
accatcgctgaggccatgattgaccacaacatagcaccctcagagtacctgtacaatccc
cagatgccgcaggacaagatgggctttgatgagatcttcctgatcaatctgaaacgtcgt
ctggacaggagacagcggatgttgagcaccatggcctctctgggtctgcaggccaccctc
actgacgcagtggacggcaaggctctgaacacttctcagctgcaggcgttgggtatagag
atgattccaggttataaggacccatactctggccgtgttttaaccagaggagagataggc
tgcttcctcagccaccactccacctgggtacagatggcggagcgtggtctttccaaggtg
ctggtgctggaggatgacgtgaggtttgagcccaggtttaagaggcgaatgatcaccatc
atggaggaagtagagaaggccctgctggactgggatctcatctatgttgggcgtaagcgt
atgcaggtgcgccagccggagcgttcggtggaaggggttaataacctggtggaggctgac
tactcctattggacactgggctatgccctatcagcgcagggcgccaggaagctgctggct
gctcaggccttcagcaagatgttacctgtcgatgagttcctccctgtcatgttcaacaaa
caccccaattctgacttcatgtctcactttgagcctcgggacctgaaggccttctctgtg
gagcccctcctcctgtaccccacccactacacaggcgagccgggctacgtgagtgacacg
gagacctccaccatctgggacgacgaggccaccgccaccgactgggaccgcctgcacgag
cacaccaggaagacagagcagcaaggccgtatccacaccgtggcccagaacagtgtgacg
ggagactcacctccgcccgccgcccgctccacacgagacgaactctga
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