Coregonus clupeaformis (lake whitefish): 121533485
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Entry
121533485 CDS
T08357
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121533485
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121533485
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121533485
Nuclear receptors [BR:
cclu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
121533485
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121533485
NCBI-ProteinID:
XP_041695395
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Position
20:44731265..44749028
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AA seq
478 aa
AA seq
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MTKKLYSKNMRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRN
CLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQASQELAAARK
EGAEVEGHGRAYSRGSSAALSDLDDIATLPDGLLFDLPLTPEGGEREYCNLEMMGGSSSS
SQSSPEQNGLDFRDGNHHIKHEYQLLHESSLFTHTLLNTLPEGFSILEIERITASVVKSH
IETSQYGSEELKRLFWSLYTPEETRSFQSKSAEVMWQHCAIHLTNAIQYVVEFAKRITGF
LDLCQNDQIILLKAGCLDVLLIRMCRAYNPINNTVLFDGKFASAQTFKALGCDDLVAAVF
DLAKSLNRMQLSEEEMALFSAAVLLSPDRPWLKDTQQVQKLQEKVYLSLQHCLHRCGSSE
EKLAKMVSKLPMMKSICNLHIDKLKFFRLLHPETTYNFPPLYREVFSSEITFPDSTMG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaattatacagcaagaatatgagagcacaaattgaagtaataccctgcaag
atctgtggggacaagtcatcagggatccactatggcgtaatcacctgtgaaggctgcaag
ggtttcttcagacgcagccagcagaacaatgctatgtactcctgctcccggcagaggaac
tgtctgattgaccgcaccaatcggaatcgctgccaacactgccggctgcagaagtgcctg
gccctgggcatgagccgtgatgcggtgaagtttggccgcatgtccaaaaagcagagagac
agcctgtatgctgaggtccagaaacaccaggcgtcccaggagttagctgccgcccgcaag
gagggagccgaggttgaaggtcatggccgggcatacagcagaggctccagtgccgccctc
agcgaccttgacgacatcgccaccctgccggacggcctgctgttcgacctgcccctgaca
ccagagggcggcgaaagagagtactgcaatctggagatgatggggggcagcagctcgtcc
tctcagagctcgcccgaacagaacggactagacttcagagatggcaaccaccacatcaag
cacgagtaccagctgctgcacgagtccagcctattcacgcacacgctgctcaacactcta
ccggaggggttctcaatacttgagatcgagcgtataactgctagtgtggtaaagtctcac
atagagaccagtcagtacggcagtgaggagctgaagagacttttctggtccctgtacacc
cctgaggagacacgcagcttccagagcaagtctgcggaagtcatgtggcagcattgtgcc
atccacctcaccaatgccatccagtacgtggtggagtttgccaagcgcatcactggattc
cttgatctgtgtcagaacgaccagatcattcttctcaaagcaggatgtctggatgtgctt
ctgattcgcatgtgtcgcgcctacaaccccatcaacaacactgttctgtttgatggcaag
tttgccagcgcacagaccttcaaagctcttggttgtgatgaccttgtggctgccgtgttt
gacctggccaagagcctgaaccgtatgcagctctctgaagaggaaatggctctcttcagt
gctgctgttctcctgtcaccagaccgaccatggttgaaagacacccaacaggtgcagaag
cttcaagagaaagtatatctctctctgcagcattgtctacacagatgtggctcatcagag
gagaaactggcaaagatggtgtccaagcttcccatgatgaagtccatctgcaatctccac
attgacaagctcaagtttttccgtctcctccacccggagacgacatacaatttcccccct
ctgtaccgtgaggtgttcagcagtgaaatcaccttcccagactccacaatgggctaa
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integrated database retrieval system
