Coregonus clupeaformis (lake whitefish): 121533491
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Entry
121533491 CDS
T08357
Name
(RefSeq) semaphorin-4E
KO
K06521
semaphorin 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cclu04090
]
121533491
CD molecules [BR:
cclu04090
]
Proteins
121533491
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Motif
Pfam:
Sema
PSI
ig
Ig_3
I-set
Ig_2
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
121533491
NCBI-ProteinID:
XP_041695407
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Position
20:44849137..44867432
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AA seq
800 aa
AA seq
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MSPLSALGVFCGLFLPLSLSEYNTHNCIPRKSVLYQDNMKLFREQGICNYSTMLVREDLG
LLLLGAREAVYALDINDISIKKSWVYWRVTEEKQMECTYKGKHAEIECRNYIRTLHKVDD
GRMYVCGTNAFSPTCDYMTYSEGQLRLEEAQEEGKGKCPFDPFQRYSSIMVGNDLYSATS
INFLGSEPVVLRSSSSALRTEFKSSWLNEPNFVYMDLVPESNNNPEGDDDKVYLFFSENA
MEYDFYNKLMVSRVARVCKGDMGGQRTLQRKWTSFLKARLDCSLPESSLPSIVQDVFLLK
NDDWSKSVFYAVFTPQSSLSDMSAVCAYSVSAIGDVFNKGKFKTPVTVETSHVKWVMYSG
EVPTPRPGACINNAARALGMERSLDLPDKTLQFIRDRPLMDEAVRPLTGGPLLVKKGAMF
TRLVVDNVQALDGERYAVMFIGTENGYVQKAVNYAGEMFIIEEIQLYQTPEAIRTLRLSS
STGQLYAGSEYGAVQMPLSDCGRYESCLDCVLARDPYCGWDLTTGICSSVASSSSDMNMI
QSLKDGNISKCPKSETVKPENYTLVPGNNIKLPCHPDSNLAQVHWLFLGQQLPSDAKYYI
YNGGILILNASATDAGQYTCESVEQVNSRPHTRTMAVYQLQPHTNTEDEEEASETTTESP
HSHNTPLPELLEVPHTLEPPLPPESRSEDSRVVGLQVAVALLSLMLVGLVTWNLYKGSFR
NRSSENSGACQVKRLSVDYMHIQNNRTSEMKLLGPTPSHNANNNHHTVIAFKGNGEHHFS
PGHNISTMDGLGYIDNESEI
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctctctctgccctgggtgttttctgtggattgttccttcctctgtctcttagt
gaatacaacactcacaactgtatcccacgcaagagtgtcctctaccaggacaatatgaag
ctgttcagagagcaagggatttgtaactactccaccatgttggttcgagaggatttgggc
ctgctgctgcttggggctcgagaggctgtctatgccctggacatcaatgatatctccatc
aagaagtcatgggtgtactggcgggtcactgaggagaaacagatggagtgcacatacaaa
gggaaacatgctgaaatcgaatgccgtaactacatccggacgctgcataaagtggatgac
ggcagaatgtatgtgtgcgggacaaatgctttcagtcccacctgtgattacatgacgtac
tctgaaggacagctgagactagaggaagcgcaggaggagggaaaagggaaatgccccttt
gatcccttccagagatactcttccatcatggtcggaaatgacctgtactctgcaacctca
atcaacttcctgggttctgagcctgtggttctccgcagctcttcctctgcactccgcacc
gagtttaagagctcctggctcaacgagcccaactttgtgtacatggaccttgtccccgag
agcaataacaacccagagggcgatgatgataaggtttacctgttcttcagcgagaacgcc
atggagtatgacttctacaacaagctcatggtgtcacgagtggctcgtgtatgcaagggg
gatatgggcggccagcggacgctccagaggaagtggacgtcgttcctgaaggctcgtctg
gactgctctctgccagagtccagcctgccctccattgtacaggatgtcttcctactcaaa
aacgatgactggagcaaaagtgttttctacgcagtgttcactccccagtcgagcttgtcc
gacatgtctgcagtgtgtgcgtacagtgtgtcagcaatcggagacgtgttcaataagggg
aagtttaagacgccagtgactgtggagacgtcgcatgtgaagtgggtcatgtacagtgga
gaggtgcccacccccagacctggagcctgcattaacaatgcagcgcgggcccttgggatg
gagcgctccctggacctgccagacaagaccctgcagttcatcagggaccggcccctcatg
gacgaggccgtgcgccctctgactgggggtccgctgctggtcaaaaaaggagccatgttc
acacgactggtggtggacaacgtgcaagctctggatggagagagatacgcagtcatgttc
atcggcacagagaacggctatgtgcagaaggcagtgaactacgctggggagatgttcatc
attgaggaaatacagctgtaccagaccccagaggctatcaggacgctacgcctctcctcc
agcacgggtcagctgtatgcaggctcagagtatggagctgtgcagatgcctctgagtgac
tgtggccgctatgagtcgtgtctggactgtgtcttggccagagacccttactgtggatgg
gacctcaccactggcatctgctcttctgtggccagctcatcctctgacatgaacatgatt
caaagtctaaaagatggtaatatatcaaaatgtccaaaatcagagactgtgaagccagag
aactacaccttagtccctgggaacaacatcaagctgccgtgccatcctgactccaacctg
gctcaggtacactggctcttcttagggcaacagctgccgtctgatgccaagtattacatc
tacaacggagggatcctcattcttaatgcctctgccaccgacgcgggccagtacacctgt
gagtctgtagagcaggtgaacagcagaccgcacaccaggactatggcagtctatcaactg
cagccccacactaacacagaggatgaggaggaggcgagtgagacgacgacagagtccccc
catagccacaataccccactaccagagctcctggaggtgccacatactttggagccccct
ctccctcctgagtcacggagtgaagatagcagggtggtaggcctgcaggtggcggtagct
ctcctctctctgatgctggttggtctagtaacctggaatctgtataaaggaagctttaga
aacagatcttcagagaactcaggtgcctgccaggtgaaaaggctgtcagttgactacatg
cacattcaaaacaataggacttcagaaatgaagttgctgggacctacacccagtcataac
gctaacaataaccatcacacagtcatagctttcaaagggaatggggagcaccacttttct
ccaggacacaacatttccactatggacggtttgggttacattgacaacgagtcagagatc
tga
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