KEGG   Coregonus clupeaformis (lake whitefish): 121533518
Entry
121533518         CDS       T08357                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121533518
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cclu01009]
    121533518
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cclu03021]
    121533518
Protein phosphatases and associated proteins [BR:cclu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121533518
Transcription machinery [BR:cclu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     121533518
    Little elongation complex (LEC)
     121533518
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing CC149 Seryl_tRNA_N DUF6902
Other DBs
NCBI-GeneID: 121533518
NCBI-ProteinID: XP_041695466
LinkDB
Position
20:46020369..46061592
AA seq 654 aa
MAALKEEQCYGLSCGRVSNGSNVSVFHVKLTDSALRAFEGYQSNKGLSSQPLIRFTGSQG
KISIPRSENPNELRTFTFYLSNVGRDNPQGSFDCIQQYITSEGSIQLDCLGGIQDKITVC
ATDDSYQKARQSMAQAEEETRSRGAIVIKPGGRYVGKKVQIRKPAPGLSDIAPSRRTSRP
VIISSSVVKKSTVQQRPLRERLTHLLALKPYRKPELILRLQKDGLLPFDKDSLDSLLQQV
ANLNVRDNTFTLKDSLFKDIQKDWPGYTEGDQQLLKRILVRKMCQAQSQTPSTATTVAPP
AEVPLPVSPPKELASSSPSQKRPAADFIDPLANKKPRISHMANKAAVPINGKQSSSNGKE
VSGAMVAVPAMGEGVMSSSQLPLLDIHRPFDPLSDVSNDSSHNGRDCEGQEAAVAERLSQ
PPVFSGPAALSVPTLGPTSPGHTGLDGPRGKSTSPSLHGKSKKKSKKHKDKEKSKERERG
RVREKERKGAEEPVPEPRKACDIPSSPENLKSSSIPHSSTDLNGMCNNTSVPSSSTEMTD
YLSEYTVIGSSEQRQTYKNDFNTEYSEYRGLHARIEGITRQFTVLDTELKQLQQGTDKYK
TIHNQILQEYRKIKKTNPNYSQEKNRCEYLHSKLAHIKKLIAKYDQQQLQNWTG
NT seq 1965 nt   +upstreamnt  +downstreamnt
atggcggcgttgaaggaggagcagtgctacggattgtcctgtggacgagtgagcaatggt
agtaatgtctccgtctttcacgtaaaactcactgacagcgccttgagagcatttgaaggt
tatcaaagcaacaagggactgtcttcacaaccgctgatccgatttactggaagccaaggg
aaaatctcaataccacggtcggaaaatccgaatgagctgcgaacatttactttctacttg
tccaatgttggtagagacaacccacagggcagctttgactgcatccagcagtacatcacc
agtgaggggagcattcagctggactgcctgggtgggatccaagacaagatcacagtgtgt
gccacggacgactcttaccagaaggccaggcaaagcatggctcaggcagaggaggagacc
cgcagcaggggtgctatcgtcatcaagcctggcgggagatacgtgggtaagaaggtgcag
atccggaaaccagcacctgggctgtctgacatcgctccatcgcggcggacgtcgcggccg
gtcatcatctccagcagtgtggtgaagaagagcacggtgcagcagaggcccctgagggag
cgcctcacccacctgctggccctcaagccctacaggaagcctgagctcatcctgcgcctg
cagaaggatggcctcttgccctttgacaaggactctctggacagccttctgcaacaggtg
gctaacctaaatgtgagagacaacaccttcacattgaaggactctttattcaaggacatt
cagaaggactggccaggctacactgagggagaccagcaacttctgaagaggatccttgtt
cggaaaatgtgtcaggcccagagtcagactccgagcactgccaccacagtggctcctcca
gctgaggtcccactcccagtgagccctcccaaagagctggctagcagctccccgtcgcag
aaacggcctgctgcggatttcatcgatcctctggccaacaaaaagcccaggatatcacac
atggccaacaaggcagcggtgccaataaatggcaagcagagttcctccaatggaaaggag
gtgagtggggccatggtcgccgtgccagcgatgggagaaggcgtgatgtccagctcccag
ctccccttactggacatccaccggcccttcgacccactctccgacgtcagtaacgattcc
agccacaatggccgggactgtgagggccaggaggccgccgtggctgagagactgagccag
ccaccagtcttctctgggcccgcagcgctgtccgtaccaaccctgggccccacgtcccct
ggacacactggcctagatgggccccggggcaagagcacctcgccctccctgcacggcaag
tccaagaagaagtccaaaaaacacaaagacaaggaaaagtccaaagagagggaacggggg
agagtgagggaaaaggagaggaaaggagcagaggagcctgttcctgagccaagaaaagcc
tgtgacatcccctccagccctgaaaacctgaagagcagtagtattccacacagcagcaca
gatctcaatggaatgtgcaacaacaccagtgttccttcatcatcaactgagatgacagac
tatttatcggagtataccgtgattggctcttccgagcagcgtcaaacatacaagaatgac
tttaatactgagtatagtgagtaccggggcctccacgctcggatagagggcatcacccgg
cagttcactgtgctcgacactgagcttaagcagctccaacaaggcacagacaagtacaag
acaattcacaatcagatactccaagagtatcgtaaaataaaaaagacgaatcccaactat
agccaagagaagaaccgctgtgaatatctacacagcaaactggcacatataaagaaactt
atagctaagtatgatcaacagcaacttcaaaactggactggttga

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