Coregonus clupeaformis (lake whitefish): 121533531
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Entry
121533531 CDS
T08357
Name
(RefSeq) unconventional myosin-Vb-like
KO
K10357
myosin V
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121533531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121533531
04131 Membrane trafficking [BR:
cclu04131
]
121533531
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121533531
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121533531
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121533531
mRNA cycle factors
P-body specific factors
121533531
Membrane trafficking [BR:
cclu04131
]
Others
Actin-binding proteins
Myosins
121533531
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121533531
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121533531
BRITE hierarchy
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
121533531
NCBI-ProteinID:
XP_045061736
LinkDB
All DBs
Position
20:46542341..46558997
Genome browser
AA seq
1687 aa
AA seq
DB search
MIGTMELYTKGASVWVPDPEAVWVSAKLLKDYNLGDENVLLQISDGREVQYPVVPPSGLP
PLGNPDILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVALNPYDQLPIYG
EEVIDAYSGQDMADMEPHIFSVAEEAYRTMTREEKNQSIIISGESGAGKTVSAKFTMRYF
AVVGGAAQQTSVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFGRKGDIIGANMR
TYLLEKSRVVFQASQERNYHIFYQLCASRDLPEMRVLKLGGAETFRYTNQGGEDSMQIPG
TDDVVDLERTRNAFTILGVPPDQQMELFRILAAVLHLGNVNIQASGRGGDRSYIDGEDRS
LAVFSKLLGVERTQMAHWLCHRRLAVGGEMLVKPMPGQQSLEARDALAKHVYGQLFTWTV
TRLNSALRAQREQPKSFIGVLDIYGFETFERNSFEQFCINYANEKLQQQFNRHVFQLEQE
EYVREELPWSRIEFSDNQPCIALIEGQLGLLDLLDEECRMPKGSEESWARKLYDQHQSND
PSPHFRKPRMSNTAFIILHFADTVQYECDGFLDKNRDTVFEEPINILRASQSELVSELFQ
QEPAGGSLSLSGGKSSLPNGSLRSGPGKRAQREHKLTVGFQFRQSLQLLMDTLNSTTPHY
VRCIKPNDLKEPFVFDPKRAVQQLRACGVLETIRISAAGYPSRWTYAEFFSRYRVLLRGG
GVQTQEQIQASCQRALPELIPDPEQYCFGKTKVFFRAGQVALLERLRAERLRAAGVIIQS
WVRGWLGRRRYIKTRWATLTIQRHTRGALARRLADILRYTKAALVLQKTYRMVAIRQMFL
MIREATVTIQAFTRGTLARRQYRLVVVERAAVLLQSAVRGWLARRAYRQVRAAIVLMQCC
VRRRAARRELVKLKAEARSVEKFRELNKGMEVKLMQLQLRADQKARESGVLRETLQVERK
AHSTELDALRGALVKLQNQLETQHQTQQPQPSPAIAEEETEERRRAEEKAAQEILRLTQE
VQALRVERDCLGKEKEDLSTRLLEQETAQEKCVVQAVAQEGKALTAELDEERRKYQGLLR
EFTRLEQRYENLREMSMLTEHSKGYRRTDSNQSLIMEPPSPSPSPMSPPFSGPPTFPVTP
SFSSLSAFPSPEEVRRVSVTSPTTERRAWLGSDTPMDTLMENVGVAKDSAGKMTGEDLGH
AYDAVRVANKFLENQLRSQRSQEEAELEALQLQAKRTCSDPSSTADQQYLVELVEAREQE
VCRLRRELKELRHTVTLRRLLAQTGPVLAQCTEDSPAPQAKAGTVTGLLECRKRDEAKLM
KTLITDVRVDSALSLPPGLAASVLFLCVRQADCSGDKTRARSLCTAAVTAMKGALKKHCN
DVDMTALWLKDACLLTDLLTQHSKQGEDLVPLTSDLSELNRALSDLCIQAYQQLLSISES
RLQPIIVPAMLESEMIPGLSGSGVKLGNSRKRAGSDPRAGERNAGEAPTMAAVLRELGAL
HTALSRQALPPTLMEQAFRQLTYLLSASALNSLLLRKDMCSWSRGLQIRYNVSLLEEWLR
SRGLQAGGAVALLEPLIQAAQLLQVGKKTDADAQALVHTCTALSTQQIVKILTLYTPHSD
LEERVTLNFIRTVQGLLKQRPGGQPPQLLMDVRRVFPVTFPYLPPPPVRADQLDIPDSLK
ISFLRRP
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgattggaactatggagttatacaccaagggtgccagtgtgtgggtgccagacccagag
gcagtgtgggtatcagccaagcttctcaaggactacaaccttggagacgagaatgtactg
ctgcagatcagcgatggcagggaggtgcagtacccagtggtgccaccctctggcctcccc
cctctggggaaccctgatattctggagggggagaatgacctcactgctctcagcttccta
cacgagcctgctgttctacataacctgagagtccgattcctggactacagcagcatctac
acctactgtgggattgtgttggtggccctcaacccgtatgaccagctgcccatctatgga
gaggaggtgatcgatgcctacagtgggcaggacatggctgacatggagcctcacatcttt
tctgtggcagaagaggcctaccgcaccatgaccagggaggagaagaaccagtccattata
attagtggggagtctggagcagggaaaacagtctctgctaagttcaccatgcgctacttt
gctgtggtggggggagcagcgcagcagaccagtgtggaggagagagtactggcctccaac
cccatcatggagtccattgggaatgctaagactacccgcaacgacaacagtagccggttt
gggaagtacattgagatcggcttcggacggaagggagatatcattggggccaacatgagg
acatacctgctggagaagtctcgagtcgtcttccaggcgtcacaggagagaaactaccac
atcttctaccagctgtgtgcttctagggacctgccagagatgagagtcctcaaactgggt
ggtgctgaaacgttccgctacacaaaccaaggaggggaagattccatgcagatcccaggc
actgatgatgtagtagatctggagcgcactcgcaatgcattcaccattctgggtgtgcct
cctgaccagcagatggagctcttcaggatcctggcagctgttctgcacctgggcaatgtc
aacatccaggccagtgggagaggtggtgatcgaagttacattgatggggaggaccgttcc
ctggcggtgttctccaagctgctgggggtggagcggacccagatggcccactggctgtgc
caccgcaggctggcagtagggggagagatgctggtcaagcccatgcctggtcaacagtcc
ctagaggcccgggacgccctggccaagcatgtgtacggtcagctgttcacctggaccgtg
acccggctcaactctgccctccgagcccagagggagcagcccaagtcatttattggggtg
ctggacatctatgggtttgagacctttgaaaggaacagttttgaacagttctgtataaat
tacgccaatgagaaattgcagcagcaattcaacaggcacgtgttccagttggagcaggag
gagtatgtccgtgaggagctgccgtggagcaggatagagttcagtgataaccagccgtgc
atcgctctcatcgaggggcagctgggcctgctcgacttgctagatgaggagtgcaggatg
cccaaaggttcagaggagagctgggctaggaagctgtatgatcagcatcagagtaacgac
cccagtccacacttccgcaaacctcgcatgtccaacactgccttcatcatcctacacttt
gctgacacggtgcaatatgaatgtgatgggtttttagacaagaaccgggacaccgttttt
gaggaacccatcaacatcctaagagccagtcagtctgagctggtgtctgagctgttccag
caggagccagcagggggcagtctgtccctgtcaggggggaagtcctctctgcccaatggg
agtctacgctctggccctgggaagagagctcagcgggaacacaaactcactgtgggcttc
cagttccgtcagtctctgcagctgctgatggacactctgaacagcaccaccccccactac
gtccgctgcattaagcccaatgacctcaaagagccttttgtgttcgaccctaaaagggcc
gtccagcagctgcgtgcctgtggggtgctggagaccatacgcatcagtgctgcaggctac
ccatccaggtggacctatgcagagttcttcagccggtaccgggtgctgctgcgcgggggt
ggggttcagacccaggaacagatccaggcgtcgtgccagagggccctgccggagctcatt
ccagacccggagcagtactgctttgggaagaccaaggtgttcttccgtgcggggcaggtg
gctctgctggaaaggctgagggcggagaggctgagggcagccggggtgatcatccagagc
tgggtcagaggctggctgggccgcaggcgatacattaagacccgctgggcaacactcacc
atccagagacacaccagaggagccctggccaggcggctggcagacattctgcgctacacc
aaggcagcgctggtcctccagaagacgtaccgcatggtggcgataagacagatgttcctg
atgatccgcgaggccaccgtcaccatccaggctttcaccaggggaacgctggcacgacgc
caatacagactggtggtggtggagcgggcagcggtgttgctccagtctgcagtgcgtggc
tggctggcccggcgggcgtacaggcaggtgagggcggccatagtgctgatgcagtgctgt
gtgaggcggcgggcagccaggagggaactggtgaagctgaaagccgaggctcggtcggtg
gagaagttcagagaactcaacaagggcatggaggtcaaactgatgcagctgcagctcagg
gccgaccagaaggccagggagagcggtgttctgagagagaccctccaggtggagcgtaag
gcccacagcactgagctggacgccctgcggggggcgctagttaaactgcagaaccagcta
gagacccagcaccagacacagcagcctcagcccagcccggccatcgcagaggaggagaca
gaggagaggaggagggcagaggagaaagcagcccaggagatcctacgactcacacaggag
gtgcaggctctgcgggttgagagggactgtttggggaaagagaaggaggatctgagcact
cgtttgctggagcaggagacagctcaggagaagtgtgtagttcaggctgtggcccaggaa
ggtaaagctctgacagcagagctggatgaggagaggaggaagtaccagggtctgctcaga
gagttcaccaggctggagcagagatacgaaaacctacgggaaatgagcatgctcactgag
cactctaagggctacagacggacagattcaaatcaaagcctgatcatggagcccccgtcc
ccatctccgtccccgatgtcaccccccttttccgggcccccgaccttcccagtcacacct
tccttctccagcctatctgccttcccctctccggaggaggtgaggagggttagtgtgacg
tcccccaccacagagaggagggcctggcttggctctgacacacccatggatactctgatg
gagaatgtgggtgtggctaaagactcagctgggaagatgacaggagaagacctggggcac
gcctatgatgctgtacgagtggccaacaagttcctggagaaccagctgcgtagccagcgc
tctcaggaggaggcggagttggaggctctgcagttgcaggctaaacggacgtgctctgat
ccctcctccactgcagaccagcagtacctggtggaactggtggaagccagggagcaggag
gtctgcagactgaggagagaactgaaggagctgagacacacagtcacactccgaagacta
ctggcacagacaggcccagtgctggcccagtgcacagaggattcccctgcaccccaggcc
aaggctgggactgtcactgggctactggagtgtaggaagagagatgaggccaagctcatg
aagaccctcatcacagacgtgagggtggacagtgccctctccctgccccctggcctggct
gccagtgtgctgttcctgtgtgtacgccaggcagactgcagcggagacaaaacccgtgcc
cgctccctctgcactgctgctgtcactgccatgaagggcgctctgaagaaacactgtaat
gatgtggacatgacagcactgtggctgaaagatgcctgccttctcactgacctactgacc
cagcactccaaacagggtgaggatttggttccgttgacctctgacctgagtgagctaaac
cgtgctctgagtgacctctgtatccaggcctatcagcagctcctgtccatctcagaaagc
cgcctgcagcccatcattgttcctgccatgctggagagtgagatgatcccaggactgtct
gggtcgggggtgaagctggggaactctaggaagcgtgcggggtctgaccccagggccgga
gagaggaatgcaggggaggcccccactatggctgcagtgctgagggagctgggtgccctc
cacacggccctgtcccgccaggccctgccacccaccctgatggagcaggccttccgccag
ctcacctacctcctctctgcctctgccctcaacagcctgttgctacgcaaggacatgtgt
agctggagccgcggcttgcagatacggtataatgtgagtctgctggaggagtggctgcgg
agccgtgggctgcaggcagggggagctgtagccctgttggagcctctcatccaggccgct
cagctcctgcaagtgggcaagaagacagacgctgatgcacaggccctcgttcacacctgc
actgccctgtccacccagcagattgtgaaaattctgaccctgtacacccctcacagtgac
ctagaggagagggtgacactcaattttatccgcacagtgcagggtctgctgaagcagcgt
ccgggcggtcagcctccacagctgctgatggacgtacggcgtgtgttccctgtcaccttc
ccgtacctgccgcccccgcccgtccgcgctgaccagctggacatcccagactccctcaag
atctccttcctacgacgtccttag
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