Coregonus clupeaformis (lake whitefish): 121533532
Help
Entry
121533532 CDS
T08357
Name
(RefSeq) protein unc-13 homolog A-like isoform X1
KO
K15293
protein unc-13 A/B/C
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121533532
Membrane trafficking [BR:
cclu04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
121533532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MUN
C2
C1_1
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
121533532
NCBI-ProteinID:
XP_045061458
LinkDB
All DBs
Position
20:complement(46563166..46612367)
Genome browser
AA seq
1834 aa
AA seq
DB search
MSLLCVGVKKAKLDGPQDKFNTYVTLKVQNVKSTTIAVRGAQPCWEQDFMFEINRLDLGL
TVEVWNKGLIWDTMVGTLWIPLQNIRQSNEDGPGQWLTLDSQVIMAENEITGTKDPTFHR
VLLDTRFELPLDIPEDEARYWAKKLEQLNAMRDQDYTYQEEEERPLQAPSTQCCNWSLWG
DQQNEDPDSAVDDRDSDYRSETSNSIPPPFYTTSQPNASMHQYPIQRDQRYSSHTSYNGS
IQELDYDNQRPMRRYDSLDSATNGRSDLDSASGSSRRTSRQYSLDSRHSLSDSPTGSSRY
ASSGELSRGSSQLSEEFGPENEGSLRGSVELYDENDSYHSCHSSVSYDKESAGWDPDEPE
VVYSDEGGYVKDGGEEGAIYDEEEGELYEPEEGEGEFNYEGEEEMIYEEDEDLYPLDGAL
SEDQEPPYTPTPTSTAPTLAPEASITRPPLEKQASLREQQPEPSTLAPTTQAQTMPPVQP
PVTTASTKPPFTPMIHPSLIQSPVPTAQPPAPDTQPPVSDALDDILLDLQEEEPLSLEQE
VPVVESPPAEVPAEKSETPVVSYQRPIMEPGPDRARANWQRLCSKVRLQLQQARGESVGI
CSLLLSAGVGGALYSIDSMPDLRKRKAMPLVRDLVSAMSLAQNSRKAGITSAMASSTLNN
EELKSHVYKKTLQALIYPISCTTPHNFEVWTATTPTYCYECEGLLWGIARQGMRCTECGV
KCHDKCQDLLNADCLQRAAEKSSKHGAEDRTQNIIMVLKDRMKIRERNKPEIFELIQEVF
AMVKATHVTYMKQIKQSVLDGTSKWSAKISITVLCAQGLQAKDKTGTSDPYVTVQVGKTK
KRTKTIYGNLNPVWEENFNFECHNSSDRIKVRVWDEDDDIKSRVKQKFKRESDDFLGQTI
IEVRTLSGEMDVWYNLDKRTDKSAVSGAIRMHINVEIKGEETVAPYHVQYTCLHENLFHF
VTDVQSSGVVKIPDAKGDDAWKVYFDETPQEIVDEFAMRYGVESIYQAMTHFACLSSKYM
CPGVPAVMSTLLANINAYYAHTTQATNNVSASDRFAASNFGKERFVKLLDQLHNSLRIDL
SMYRNNFPASSSERLQDLKSTVDLLTSITFFRMKVQELQSPPRASQVVKDCVKACLNSTY
EYIFNNCHELYSREYQTDPAKPGVEHPEEQGPSIKNLDFWSKLITLIVSIIEEDKNSYTP
CLNQFPQELNVGKISAEVMWNLFAQDMKYAMEEHEKNRLCKSADYMNLHFKVKWLYNEYC
KDLPFFKSRVPEYPAWFEPFVIQWLDENEEVSRDFLHGALERDKKDGFQVTSEHALFSCS
VVDVFSQLNQSFEIIRKLECPDPQIVGNYMKRFAKTIGNVLLSYADIISKCFANYVNMEK
VPCILINNIQQLRVQLERMFEAMGGKDLCKEASDFLKDLQVKLNTVMDDLSRIFSVSFQP
QIEDNVKQMGDILGQVKGTNVGANNCSSVAQDADNVLQPIMDFLDSNLTLFAKICEKTVL
KRVLKELWKLVMNTMEKTIVLPPLTDQTMIGRVKLACHSDGTQLISNAAKQLGQLSKIKE
HMGREEAKALSPKQCAVIELALDTIKQYFHAGGVGLKKTFLEKSPDLLSLHYALSLYTQA
TDKLIKTFVSSQNAQVFGGKGVRFTASEDVYPEKGSGVDDAVGEVSIHVEIFTHPNTGEH
KVTVKVVAANDLRWQTTGVFRPFVEIYIIGPHLADKKRKYATKSKNNSYAPKYNETFTYT
LSNEVGTECYELQVCVKDYCFAREDRTVGMAVMQLKDMSSRGSVACWLPLGKRIHMDETG
LTVLRILSQRNNDDVAKEFVKLKSDQRSPEEGRG
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgctgtgcgttggagtgaagaaagccaaactcgatggaccccaagataaattt
aacacctacgtgacgcttaaagtgcagaatgtcaagagcaccaccattgcggtgcgggga
gcccagccatgctgggagcaggacttcatgtttgagatcaacaggctggacctggggctg
acggtggaggtgtggaacaaagggttaatctgggacaccatggtgggcaccttgtggatc
cccctgcaaaacatccgccagtccaatgaggacgggccggggcagtggctgacactggac
tcccaggtcatcatggctgagaatgagatcaccggcaccaaagaccccaccttccaccgc
gtgctgctggacacccgctttgaactgccattagacattccagaggatgaggctcgatac
tgggccaagaaactggagcagctcaacgccatgagggaccaggactacacgtaccaggag
gaggaggagagaccactgcaagcgccatcaacacaatgctgtaactggagtctgtgggga
gaccagcaaaatgaggatccagacagtgcggtggacgacagagacagtgactaccgcagt
gagactagtaacagcatccctccacccttctacaccacgtctcagcccaacgcctccatg
caccagtaccccatccagagagaccagcgctactcctcgcacacctcctacaacggctcc
atccaagagctggactacgacaaccagagacccatgagacgctatgatagtttagactcg
gccaccaacgggcgcagcgatctcgattcagcctcaggttcgagccggcgcaccagccgc
cagtactctctagacagtaggcactcgctctccgatagtcctacaggcagcagtcgctat
gcctcctctggggagctgagtcgaggcagctcccagctcagtgaggagtttggccctgag
aacgaggggagcctgaggggctctgtggagctctacgacgagaacgactcttaccactcc
tgccactcctctgtcagctacgacaaggaatcggctggctgggaccccgatgagcccgag
gtggtgtacagcgacgaagggggctatgtcaaagatggcggggaggagggggctatttac
gatgaggaggagggcgagctctacgagcccgaggagggagagggggagttcaactatgag
ggagaggaggagatgatttacgaagaagatgaagatctctaccctctggacggcgcgctc
agcgaggaccaggagccgccctacacccccacccccacaagcacggcccccacgctggcc
cccgaggcctccatcaccaggccccctctggagaaacaggcctctctgagagagcagcag
cccgagccctccaccctggcccccaccacccaggcccagaccatgccccctgtccagccc
cctgtcaccacagcctccaccaagcctccattcacccctatgatccatccatccctcatc
cagtccccagtgcccacagcccagccccctgctccagacacccagcctccagtgtctgat
gccctggatgatatcctcctagacctccaagaggaagagcctctgtctttagagcaggag
gtccctgtggtggagagccccccagcagaagtcccagcagagaagagcgagactcctgtt
gtcagctatcaaaggcccatcatggagcctggtccagacagggccagggccaactggcaa
cggctctgcagcaaggtccgactacagctgcagcaggcaagaggggagtcggttgggatt
tgctccctgttgctatcagcaggggtgggtggggcgctgtatagcattgacagcatgccg
gacctccgcaagaggaaagccatgcctctggtcagggacctggtcagtgctatgtccctg
gctcagaactccaggaaggcagggattacatcagccatggcgtccagcactctcaataat
gaggaactgaagagccatgtgtacaagaagaccctgcaggctctgatctaccccatctcc
tgcaccacgccccataactttgaggtgtggacagccaccactcccacctactgctacgag
tgtgaggggctgctgtggggcatcgcccgccagggcatgagatgtaccgagtgcggggtc
aaatgtcacgataagtgccaggacctactcaatgctgactgcctgcaaagggcagcggaa
aagagttctaagcatggggcggaggacagaacccagaacatcatcatggttctgaaggac
aggatgaagatccgggagaggaacaagccagagatctttgagctgatccaggaggtgttt
gccatggtcaaagccactcacgtcacctacatgaagcagatcaaacagagcgtactagac
ggcacctccaagtggtcggccaagatcagcatcacagtgctgtgtgcccagggccttcag
gccaaggataaaaccggcacgagtgacccttacgtcacggtccaggtgggcaagaccaag
aagaggaccaagaccatctacggcaacctcaaccctgtctgggaggagaacttcaacttt
gagtgccacaactcctcggaccggatcaaggtgcgggtgtgggacgaggatgatgatatc
aagtctcgggtgaaacagaagttcaagagggagtcagatgacttcctgggtcagaccatc
atcgaggtccgcacgctgagcggagagatggacgtctggtacaacctggacaagcgtaca
gacaagtcagccgtgtctggtgccatcaggatgcacatcaatgtagagatcaaaggagag
gaaacagtcgctccatatcatgtccaatacacctgtctgcacgagaacctcttccacttt
gtcacagatgtgcagagctctggtgttgtgaagattcctgatgctaaaggggatgatgcg
tggaaggtgtactttgatgagactcctcaggagatagtggatgagtttgccatgcgctac
ggagtggagtccatctaccaggctatgactcactttgcctgcctgtcgtctaagtacatg
tgcccgggggttcccgcggtaatgagtaccctgctggccaacatcaatgcctactacgcc
cacaccacccaggccaccaacaacgtgtcggcctctgaccgctttgccgcatccaacttc
gggaaagaacgatttgtgaagctcctggatcaactccacaactctctgaggattgacctg
tccatgtaccggaataacttcccagccagcagttctgagaggctgcaggacctcaagtct
actgtggacctgctcaccagcatcaccttcttcaggatgaaggtccaggagctacagagt
ccccccagagccagtcaagtggtgaaggactgtgtcaaggcctgtctcaactccacctac
gaatacatcttcaacaactgccacgagctctacagccgcgaataccagacagatccggcc
aagccaggagtggaacacccagaggagcagggtcccagcatcaagaacctggacttctgg
tccaaactcatcaccctcatcgtgtccatcatagaggaggacaagaactcctacacaccc
tgcctcaaccagtttcctcaggagctcaacgtgggtaaaatcagtgctgaggtgatgtgg
aacctgtttgctcaggatatgaagtacgccatggaggagcatgaaaagaaccggctgtgt
aagagtgcggattacatgaacctgcattttaaagtcaagtggctctacaacgagtactgc
aaagacctgcccttcttcaagagccgtgtgcccgagtacccggcgtggtttgagccgttt
gtcatccagtggttggatgagaatgaggaagtgtctcgagacttcctgcacggtgcgctg
gagagggacaaaaaggacgggtttcaggtaacgtcagaacatgctctgttctcctgctcc
gtggtggacgtcttctctcagctcaaccagagctttgagatcatccgcaagctggagtgt
cccgacccccagatcgtaggcaactacatgaaacgattcgccaagaccatcggcaacgtt
ctcctgtcctacgctgacatcatctccaagtgctttgctaactatgtcaacatggagaaa
gtgccatgcatcctgatcaacaacatccagcagctcagagttcaactggagaggatgttt
gaggccatgggaggaaaggatctgtgcaaggaggccagtgacttcctgaaagacctgcag
gtgaagctgaataccgtgatggatgatctcagcaggatattttctgtcagtttccagccg
cagattgaggacaatgtgaagcagatgggagacatccttggtcaggtgaaggggaccaac
gtgggggctaacaactgcagtagcgtggcccaggacgctgacaatgtgctgcagcccatc
atggacttcctggacagcaacctgacgctgtttgctaagatctgcgagaagacggtgctg
aaacgtgttctgaaggagctgtggaaactggtgatgaacaccatggagaagactatcgtc
ctgccccctctcaccgaccagacgatgattgggagggtgaagcttgcttgtcacagtgat
ggcactcagctcatctccaacgctgccaagcagctgggacagctctccaagataaaggag
cacatgggtcgtgaggaggccaaagcgctgtcccctaagcagtgtgctgtgatagaacta
gccctggacaccatcaagcaatacttccatgctggaggggtgggcctgaaaaagacgttc
ctggagaagagtcctgacctgttgtctctacactacgccctgtccctctacacgcaggcc
acagacaaactcatcaagacctttgtttcatctcagaatgcacaagttttcggcgggaag
ggggtgaggttcacggctagtgaggatgtgtacccagagaagggctctggagtggacgac
gccgtgggagaggtgtctatccacgtggagatcttcacccaccccaacactggagagcac
aaggtcaccgtcaaagtggtggcagccaatgacctgaggtggcagaccacgggggtgttc
cgtcccttcgtggagatctacatcatcggtcctcacctggctgacaagaagaggaagtac
gccaccaagtccaagaacaacagctacgcccccaaatacaacgaaacgttcacatacacc
ctcagtaacgaggtgggcacagagtgttacgagctgcaggtgtgtgtgaaggactactgc
ttcgcccgggaggaccgtacggtgggcatggccgtgatgcagttgaaggacatgtcctct
aggggcagcgtggcgtgctggctccccctgggtaaacgcatccacatggacgagacgggc
ctcaccgtcctccgcatcctgtcccagcgcaacaacgacgacgtggcaaaggagttcgtc
aagctcaagtcagaccagcgctctccggaggagggccgaggctga
DBGET
integrated database retrieval system
