Coregonus clupeaformis (lake whitefish): 121533534
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Entry
121533534 CDS
T08357
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X1
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121533534
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
121533534
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF4763
PI3K_P85_iSH2
DUF4164
Motif
Other DBs
NCBI-GeneID:
121533534
NCBI-ProteinID:
XP_041695500
LinkDB
All DBs
Position
20:complement(46613248..46621310)
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AA seq
304 aa
AA seq
DB search
MGGVKQEQNDGPPPRGMQSSDAAHEEHVRSLSVQPVKKRGWPKGKKRKKVLPNGPKAPVT
GYVRFLNERREQIRAKHPDLPFPEITKRLGAEWSCLAPHDKQRFLDEAEREKLQYARELR
EYQQSEAYQITSAKIQDKKVKREESPSVIINANSSGSAALKGSDYLSNRFDVPIFTEEFL
DQNKAREAELRRLRKANVEFEEQNAVLQKHIADMYSAKERLEAELGQDELRTQALHRHLL
AIKHTLVSSLSTVALPGTGETPSLGTLDSYLSRLSGTLESNPHEHRALLTQLRDVLSHLD
SEKL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtgtgaagcaggagcagaatgatggacctccaccaagaggcatgcagtcctct
gatgcagcacacgaagagcatgtccgttctctttccgtacagcctgtgaagaagagggga
tggccgaagggtaagaagagaaagaaggttttgcccaacggtcccaaggcaccagtgacg
ggatatgtgcgctttctgaatgaaaggcgagagcagatccgtgctaagcaccctgacctg
ccctttccagaaattaccaagaggctgggcgcagagtggagctgcttagcacctcatgac
aaacagcgcttcctggatgaggcggagcgagaaaagctgcagtatgcccgggagctgaga
gaataccaacagagtgaggcctatcagatcaccagtgccaagatccaggacaagaaggtc
aagagagaggagtccccatctgtcattatcaatgctaacagttctggatcagctgctctg
aagggttcagactatctgtccaacagatttgatgttccaatattcacagaggagttcctg
gaccagaacaaggcccgggaagcagagctgcggcgtctacgcaaagccaacgtggagttt
gaggagcagaacgccgtgctgcagaagcacatagcagacatgtacagcgccaaagagagg
ctggaagctgaactggggcaggatgagctccggactcaggccttgcacaggcacctgctg
gccatcaaacacaccctcgtcagcagtctgtccactgtggccctgccaggcacaggtgag
accccctctcttggtaccctggactcttacctgagtcgcctgagtggtactctggagagc
aaccctcatgagcaccgtgccttgctgactcagctccgcgatgtcctttctcacctggac
agtgagaagctatga
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