Coregonus clupeaformis (lake whitefish): 121533539
Help
Entry
121533539 CDS
T08357
Name
(RefSeq) CUGBP Elav-like family member 5 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121533539
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121533539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
121533539
NCBI-ProteinID:
XP_041695507
LinkDB
All DBs
Position
20:46797662..47040611
Genome browser
AA seq
553 aa
AA seq
DB search
MARFTQTETRRQQQPQQPHPAHTSLVFTGPGAPPTQQPLLLIPHQHQYSQITFPKPMNGS
ESISIHPESGNMKDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKG
CAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEE
DVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHAEAQSAISALHGSQTMPNGYDSLP
PQGASSSLVVKFADTDKERTIRRMQQMVGQFGIFNPAIALPFSTYSTYAHAALLQHDNEL
MQQQAAIMAASHGGYLTPSMAFPATQLHQMGALSINGLPPNSMTPVSGEFHQALGKQCVS
FSLGLSSPPANITTPSIVTPIVNGFTGIPHHQPNGHPAVETMYTNGLPPYSTQSPTAADT
LQQAFTGVQQYTAIYPAGTLTPIGQTLPQPSQVIQQQQQREGEGPEGCNLFIYHLPQEFG
DNELMQMFLPFGSVISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLK
VQLKRPKDASRPY
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggccagattcactcagactgaaacaagaaggcagcagcaaccacagcagccccatccc
gctcacaccagcctggttttcactggacctggggcaccaccgacccaacaaccactacta
cttatccctcaccagcaccagtactctcagatcacatttcctaaacccatgaacgggtca
gaatccatttcaattcatccggagagcggcaacatgaaagaccaagatgccataaagctg
tttatcggacagataccgcggaacctagaggaaaaagacctgaaacctctgtttgaacag
tttggaaaaatccacgaactgaccgttctgaaggaccgatacaccggcatgcacaaaggc
tgcgcgttcctcacttactgcgcccgcgagtcggccatcaaagcccagaacgccctccat
gaacagaaaacactgccagggatgactcgccccatccaggtgaagccggctgacagtgag
agtcgtggagaagacaggaagctgtttgtggggatgctaaacaaacaacagactgaggag
gacgtgtaccgcctctttgagccctacggagtcatcgaggagtgcaccgtcctaagaggt
cctgacggaaacagcaaaggctgtgcctttgtaaagttctccacacacgctgaggcccag
tctgcaatcagtgcccttcatggcagccagaccatgccaaacggctacgattctctcccc
ccccagggcgcctcctccagcctggtggtgaagtttgccgacaccgacaaggagcgcacc
atccgccgcatgcagcagatggtgggccagttcggcatcttcaacccagccatcgccctg
cccttcagcacctacagtacctacgcacatgcagcactgctgcagcatgacaatgagctc
atgcagcagcaggcagccatcatggcagcgagccatgggggctacctgacacccagcatg
gccttccccgccacccaactccaccagatgggggcactcagcatcaacggcctcccaccc
aactccatgaccccggtgtctggtgagttccatcaggcactgggtaagcaatgcgtttca
ttctctttgggcctcagctctccaccagccaacatcaccactcccagcatcgtcactccc
atcgtcaacggcttcacgggcatcccccaccatcagcccaacggacatcccgccgtggag
accatgtacaccaacggcctgccgccctactccacccagagccccactgccgcagacacc
ctccagcaagccttcaccggagtacagcaatacacagctatctacccagctggcacactg
actcccataggccagacactgcctcagccatcacaggtcatccagcagcagcaacagaga
gaaggtgaggggcctgagggctgtaacctgttcatctaccacctgccacaggagtttgga
gataatgaactcatgcagatgtttctgccttttgggagcgtcatctcctccaaggtcttc
atggaccgagctaccaaccagagcaaatgcttcgggtttgtgagcttcgacaacccagct
agcgcacaggcagctattcaagccatgaacggctttcagattggaatgaagaggttgaaa
gtccagttaaaacgaccgaaggatgccagccgcccttactga
DBGET
integrated database retrieval system
