Coregonus clupeaformis (lake whitefish): 121533541
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Entry
121533541 CDS
T08357
Name
(RefSeq) repulsive guidance molecule A
KO
K23096
repulsive guidance molecule A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121533541
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Motif
Pfam:
RGM_N
RGM_C
C8-3_MUC4
Motif
Other DBs
NCBI-GeneID:
121533541
NCBI-ProteinID:
XP_041695519
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Position
20:complement(47061797..47082301)
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AA seq
465 aa
AA seq
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MLSTDPEDEHFGSYSVDEQQSKNSILTEWIGMGRSGPQNLAKRQLWNCITFTMVLLSLLL
RPAHCQQCRIQRCNAEYVASTSPSSGLQEDSPSDVDYCIALRAYALCTRRTARSCRGDLV
YHSAVFRIKELFTQHNCSSDGPTSSAKAHSTSRPVVSELCDYESRVLASGPAGQGKKYAH
CGLFGDPHLRTFRDEFQTCKVEGAWPLIDNRYLSVQVTNVAVVLGSSATATSKITVIFKS
YHGCTEQKVYQATTEDLPSAFQDGTRSGGEGGSLWIVEKAGSGGRLVKIQARYIGTSIIV
RRVGRYLTFAIRMPEDTLDFSEENSGLQLCLHGCPRNELIKEHMLGRQPLHPRLPGSGSN
PELGPLLPPHQIYTVERATAKCRETLQVEDVYFQSCVFDLLTTGDPEFSMAAYGALEDLK
ALPPSKLKQNSPRTPHVQQNRGGPHTLATATPSLVTLLLLVLLLL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctacggatcctgaagatgagcattttgggagctacagcgtcgatgagcagcag
tcgaagaactccattctaactgaatggattggcatggggagaagcggacctcaaaacttg
gctaagcggcagctttggaactgtattacttttacgatggttttactttcgctgctgctc
cgaccagcacactgccagcagtgccggatccagcgctgcaatgcggagtacgtggcctct
acctcgccctctagtggtctccaggaagactccccgtccgatgtggactactgcattgcc
ttgcgtgcctacgccctgtgtacccgtcgcacggcgcgcagctgcaggggtgacctggtc
taccactcggccgtgttccgtatcaaggagctcttcacccagcacaactgctccagcgac
gggcccacctcctctgccaaggcccatagcacctccaggccagtcgtgtccgagctgtgc
gactacgagagccgcgtgctggcctcgggccctgccggccagggaaagaagtatgcccac
tgtggattatttggggacccgcacctgcggacgttccgcgacgagttccagacttgcaag
gtggagggggcgtggcctctcatcgataaccgctacctgtcggtgcaggtgaccaatgtg
gctgttgtcctgggctccagcgccaccgccaccagcaagataactgtgatcttcaagtcg
taccacggctgtacagagcagaaggtgtaccaggccaccaccgaggaccttccctctgcc
ttccaggacggcactcggagtggcggggaggggggcagtctgtggatcgtagaaaaggct
ggctccgggggccgcctggtgaagatccaggcccgctacattgggacgtccatcatagtg
cgccgggtggggcgctaccttaccttcgccatccgcatgccggaggacacccttgacttt
tctgaggagaacagtgggctgcagctttgtctgcacgggtgcccgcgcaacgagctcatc
aaagagcacatgctggggcgccagccccttcacccccgcctcccgggctccgggtctaac
cccgagctggggcccctactgcccccacatcagatctacacagtggagcgcgccacagcc
aagtgcagggagaccctgcaggtagaggacgtatacttccagtcctgtgtgtttgacttg
ctcaccacaggggaccctgagttctccatggcagcctacggggccctggaggatctgaag
gcccttcctcccagcaaactgaagcagaattctcccaggactcctcatgttcaacaaaac
agagggggtccacatacgttggcaacagcaacccccagtctggtcacacttctgctactg
gttctactgcttttgtaa
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