Coregonus clupeaformis (lake whitefish): 121533557
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Entry
121533557 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121533557
04121 Ubiquitin system [BR:
cclu04121
]
121533557
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121533557
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121533557
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121533557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
C1_2
Rad50_zn_hook
HypA
DZR
DZR_2
Motif
Other DBs
NCBI-GeneID:
121533557
NCBI-ProteinID:
XP_041695541
LinkDB
All DBs
Position
20:complement(47519150..47523682)
Genome browser
AA seq
312 aa
AA seq
DB search
MAEAPPWSRRFFCHRCSEEISPRLPDYTCPRCESGFIEELLEERSSENGSTSTISSGDQN
QQSFENVDPSHMATFPSGYGQFALGVFDNSFDFGAGLGTEDNRDTENLQEQELASRQRYG
TRQPRGRHGIRRQAGRHEGVPTLEGIIQQLVNGIIAPTAMPNIGVGPWGVLHSNPMDYAW
GANGLDAVITQLLNQFENTGPPPADRDKIKSLPTILITQEHVGSGLECPVCKEDYSAGEN
VRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTAMNPPGLSGMNFATSSSPTPPSS
SSTSNENSANNS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcacctccatggtccagacggtttttctgtcacagatgttcggaagagatc
agccctcgcctccccgattacacatgtccacggtgtgaatctggcttcatcgaggaactg
ctggaggagagaagcagtgaaaatgggtccacatccaccatctccagcggtgatcagaac
caacagtcgtttgagaatgtggacccttcacacatggctacattcccctcgggttacggc
cagtttgctctaggtgtctttgataactccttcgattttggagcggggctgggaacagag
gacaaccgtgacacagagaacctgcaggaacaggagttggcatcacggcagcgttacggc
accaggcaacctcgtggacgccatggcatccggaggcaggcaggaagacatgagggagtg
cccactctagagggaatcattcagcagctagtgaatggaataatcgcccctacagcaatg
ccaaatattggtgtgggaccctggggagtgctccactcaaaccccatggattatgcctgg
ggtgccaacggactagatgcagtcattacacagttattaaatcagtttgagaacactggc
cctccgccagctgacagggacaaaatcaagagccttcccacaatcctaatcacacaggag
catgtcggctcaggtctagaatgtccagtgtgtaaagaagactacagtgctggagaaaat
gttaggcaacttccatgtaatcatttgtttcacaatgattgcataataccctggcttgaa
cagcacgacacatgtccagtgtgcaggaaaagcttgagtggacagaacacagctatgaat
cctccaggtctatcagggatgaactttgccacttcctcttcccctacacccccgtcctcc
agttcaaccagcaacgagaactcagccaacaactcctaa
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