Coregonus clupeaformis (lake whitefish): 121533562
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Entry
121533562 CDS
T08357
Name
(RefSeq) cold-inducible RNA-binding protein B isoform X1
KO
K13195
cold-inducible RNA-binding protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121533562
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121533562
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RBD_DEAH11
RRM_3
SET_assoc
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121533562
NCBI-ProteinID:
XP_041695548
LinkDB
All DBs
Position
20:47861441..47866536
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AA seq
174 aa
AA seq
DB search
MSDEGKLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFENPDEAK
DAMQAMNGKSLDGRQIRVDQAGKSGGGGRSGGGFRGGSSGGRGGGGGYFRGGRGGGGGRG
GRGFSRGGGERGYGGGRYDNRSGGSYGSDRGYYNKDRAQGGGYGDRSGGDEGGW
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgaagggaagctttttgtgggtggcctgagctttgacactaatgaacagtca
ttagaagatgtgttctccaaatatgggcaaatatctgaagttgttgtaattaaagacaga
gaaactcagaggtccaggggctttggtttcgtcacctttgagaacccggatgaggccaag
gatgctatgcaggccatgaacggcaagtctcttgacggcagacagatccgtgtcgaccag
gctggcaagtctggcggtggtggcaggtccggcggtggattccgagggggctcgtcgggc
ggcagaggaggtggaggaggatacttccgtggaggcagaggtggtggtggtggaagaggt
gggcgtggcttctcacgaggtggtggagagcggggatatggcggtggacgttacgacaac
agaagtggaggctcatacggatcagaccgaggctactacaacaaagacagagcgcaaggt
ggaggatacggagatcgttctggaggtgatgagggtggctggtag
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integrated database retrieval system
