Coregonus clupeaformis (lake whitefish): 121533580
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Entry
121533580 CDS
T08357
Name
(RefSeq) rho GTPase-activating protein 45 isoform X1
KO
K26415
Rho GTPase-activating protein 45
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121533580
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121533580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
GMIP-like_FCH
RHG29_45_N
C1_1
FCH
Motif
Other DBs
NCBI-GeneID:
121533580
NCBI-ProteinID:
XP_041695583
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All DBs
Position
20:48821985..48837463
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AA seq
1238 aa
AA seq
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MSHISAKDDVKTIVIETMLKRGSKNSYNPYSTGQRVKKEEANAKNKLDKRPNRPNVWLKQ
LSILQEQPRRDAIDTTPSSTSSSSSSSTLFPIPGALSDSSVSCPGTPSVQHSKLVGVGCP
SPGATMKRPTGLSRHASAAGFPIHSWVFTKGQGKGAVTPTPTTPQDSSESMAIEVEDIPS
LLRDVARFAEAVEKLKDVVLGEEKQENRRPLAHECLGEVLRVLRQVISTYPLLNTVETLT
AAGKLISKVKGFHYETCNDTDKKDFEKAIETIAVAFSSNVSELLMGEVDSSTLLSLLPTE
KSRSMENLYGVSGQGLEGAQMRSDLQDFGRAEEVDIMLQRSEGGVDSALAYAKTISKYMK
DLMSYVEKRTSLEVEFAKGLQRLYHSSKHSITHPHMPFYSIYSLALEQDLEQSSGVQQAT
STLHNQTFLQPLMQRKHEHEKKRKEVKEQWYRAKRKLLECESNLRKAKHAYMARCEEHDK
AKAAASRAAEEDGGGSTTKSLGKKLRVEEDARNKAEEAEATYRTCIADATTQQQELEHVK
VNVLRLLQEVIKQSDQTLRSATISYYQIMHMQTVVLPVHYQTLCESSKLYDPGQQYAAHV
RDLQLTEEPEVTYQFEPYTATTASTQQPARPLTDSFNTDQHSSSEGQPSTGETTTGEDRS
AENARKRQSHKSWGSAVSDADSVEGESPTTSSGDISKMARTSSTGTMSSNEDPDEKDGNV
ASFEAPNINGMEPEIAVPTGPFRNIGLSKAAQTHRLRKLRTPSKCRECDSYVYFQGAECE
ECFLACHKRCLETLAIQCGHKKLQGRLQLFGRDFSQVSSGSSDSIPFIITKCISEIERRA
LKMKGIYRVNGVKTRVEKLCQAFENGKELVELSQCSPHDISNVLKLYLRQLPEPIMPFRL
YNSLMGLAKESLQTEGGEAGTGGGEAGTGKGPELVDLGPDTDPAVLAVVDRLRELVKELP
KANVATLRYIVRHLRRIAELEQDNKMSPSNLGIVFGPSLIRPRPTGATVSLSSLVDYPHQ
ARIIETLIVFYTDIFQSKSSSTRSRPSFISTQQSVSVDVDEGSSAVVTEGEEQEANEEQS
RTDSDKMEEGCDSFPGSLGSSEQIVDSDSELDETGRGSTHHPHCLVKQESEVSTEDDQLS
CRDSLELSSQSLPQTDPDPDQDQEGPDASDHDPPEPPDSEPPDLEVSEEELSVSLAELNM
NQSNNYVLGHVCSKSQFAAEGQGDRVCVNITCAMCQPH
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacatttctgctaaagatgatgttaaaacaatagtgatagaaaccatgctgaaa
cggggtagcaagaatagttacaacccatactccacgggtcagagagttaagaaagaggag
gctaacgccaagaacaaattggacaaacgacccaatagacccaacgtctggctcaaacag
ctgtctattctccaggagcagcctcgtcgtgatgctatcgacaccaccccttcctcaacc
tcatcctcctcttcctcctccaccctcttccccattcccggtgccctatcggactcctcc
gtgtcctgccctggcacccccagtgtccagcacagcaagctggtgggggtgggctgcccg
tccccaggggccaccatgaagaggcccaccggcctcagccgtcatgccagtgccgcgggg
ttccctatccactcctgggtgttcaccaagggccaggggaagggggctgtcacccccacc
cctaccaccccacaggacagctcagagagcatggccattgaggtggaggacatcccctct
ctgttaagggatgtggcccgctttgctgaggccgtagagaagttgaaggacgttgtattg
ggggaagaaaagcaggagaaccgtcgccctctggcccatgagtgcctgggggaggtcctg
agggtcctacgacaggtcatcagcacctaccccctcctcaacacagtggagaccctcact
gctgcaggcaaactcatatctaaggtcaaaggatttcattatgagacgtgtaatgacaca
gacaagaaggactttgagaaggccattgaaaccattgcagttgcttttagtagcaatgtg
tcagagctgctgatgggggaggtggacagcagtaccctactgtccctgctgccaacagag
aagagcaggtctatggagaacctgtatggggtgtcgggtcagggactagagggagctcag
atgaggagtgacctgcaggactttggacgggccgaggaggtggacatcatgctgcagcgt
agtgaagggggagtggactctgctctggcctacgctaagaccatctctaaatacatgaag
gacctgatgagctacgtggagaagaggacctcactggaggtggagtttgccaagggctta
caaagactgtaccattccagcaagcacagcatcacacatccccacatgcccttctactca
atctactctctggctctggagcaggacttggagcagagcagtggcgtgcagcaggccacc
tccacactgcacaaccagaccttcctacagcctctgatgcagcgtaaacacgagcatgag
aagaaacgcaaggaggtcaaggaacagtggtaccgagccaagaggaaactgctggaatgt
gagtctaacctgcgcaaggccaagcatgcctacatggcgcgctgtgaggagcacgacaag
gccaaagcagccgctagtagagcagcagaggaagatggaggaggctcgaccaccaagtct
ctgggcaagaagttacgagtggaagaagacgctcgcaacaaggctgaagaggcagaggcc
acctacaggacatgtatagcagacgccaccacccagcagcaggagctggaacacgtcaag
gtcaatgtgctccgactgctgcaggaggtcatcaaacagagtgaccagacactgcgctcg
gccaccatctcgtactaccagataatgcacatgcagacagtggtgttgccggtacactac
cagactctgtgtgagagcagtaagctgtatgacccgggacagcagtacgctgcccacgtc
agagacctgcagctcactgaggagcctgaggtcacctaccagtttgagccctacaccgcc
accacagcctccacacagcagccagctcgaccccttactgacagcttcaacacagaccag
cacagcagctctgagggtcaacccagcaccggagagaccactacaggagaggaccgcagc
gctgaaaacgccagaaagagacaaagccacaaatcgtggggttctgcagtgagtgatgca
gacagtgtagaaggggaatctcctaccaccagttcaggtgacatcagtaaaatggcgcgc
acctcctccaccgggaccatgtcatccaatgaggatccagatgagaaggacgggaacgtg
gcctcctttgaagcaccaaacataaatggtatggagcctgagattgcggttccaaccgga
cctttccggaacattgggctctccaaagccgcccagactcatcggctgcgtaaactccgc
accccgtccaagtgtcgggagtgcgacagctacgtgtatttccagggagcagagtgtgag
gagtgtttcctggcatgtcataagcggtgtctggagacgttggccatccagtgtggccat
aagaagctgcagggtagactccagctgttcggccgagacttctcccaggtgtccagcggc
agctctgacagcatccccttcatcatcactaagtgcatttccgagatagagagacgagcc
ctgaagatgaagggtatttacagagtaaatggggtgaagactcgtgtagagaaactgtgt
caggcctttgagaacggcaaggaattagtggagctctcacagtgttccccccacgacatc
agcaacgtcctcaagctctacctccgacagcttccggagcccatcatgccgttccgcctg
tataacagcctcatggggttagccaaggagagtctgcaaactgagggaggggaggccggg
acaggaggaggggaagccgggacggggaaggggccagagctggtggacctaggaccagat
acggacccagcggtcctggccgtggtggatagacttagggagctggtgaaagagctgccc
aaggctaatgtagccacgctgcgctacatcgtacgccacctgcgcaggattgcagagttg
gagcaggacaataagatgagtcccagtaacctgggcatcgtttttggcccctctctgata
cggccccggcccacaggggccacagtgtccttgtcctctctagtagactacccccaccag
gcccgcatcatagagactctcatagtcttctacacagacatcttccagtccaaatcctct
agcaccagaagtcgcccatccttcatctccacccaacagagtgtcagtgtggatgttgat
gagggcagcagtgccgtggtaactgaaggagaggaacaggaagccaatgaggaacagagc
agaacagactctgacaagatggaggagggctgtgacagttttccaggttccctgggctcc
agtgagcagattgtggactctgactcagagctggatgagactgggagggggtccacacac
catccacactgcctggtcaaacaggagagtgaggtcagcacagaggatgaccaactgagc
tgtagggatagtctggaactctccagccagtctctaccccagaccgacccggatccagac
caagaccaggagggtcccgatgcctcagaccacgacccccctgagcccccagacagcgag
cccccggacctagaggtgtctgaggaggagctgagcgtctccctggctgagctcaacatg
aatcagtccaacaactatgttctgggccatgtgtgtagcaaatctcagtttgctgccgag
ggacagggagacagagtttgtgtaaacattacctgtgcaatgtgtcaacctcactga
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