Coregonus clupeaformis (lake whitefish): 121533585
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Entry
121533585 CDS
T08357
Name
(RefSeq) ras-related protein Rab-11B-like
KO
K07905
Ras-related protein Rab-11B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121533585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121533585
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121533585
04031 GTP-binding proteins [BR:
cclu04031
]
121533585
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
121533585
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121533585
Exosomal proteins of other body fluids (saliva and urine)
121533585
Exosomal proteins of colorectal cancer cells
121533585
GTP-binding proteins [BR:
cclu04031
]
Small (monomeric) G-proteins
Rab Family
Rab11/25 [OT]
121533585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
AAA_22
RsgA_GTPase
PduV-EutP
Csa3_N
AAA_16
ABC_tran
AAA_14
Gtr1_RagA
AAA_21
NTPase_1
TniB
DUF3289
AAA_24
FeoB_N
FAD-SLDH
AAA_5
Motif
Other DBs
NCBI-GeneID:
121533585
NCBI-ProteinID:
XP_041695595
LinkDB
All DBs
Position
20:complement(48983548..48986809)
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AA seq
217 aa
AA seq
DB search
MGNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM
LVGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIHRIVSQKQ
IADRSAHDESPGNNVVDISVPPTTDGQKNKLQCCQSL
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacagagatgatgaatacgatttcttgttcaaagtggtgctgatcggagactct
ggtgtagggaagagtaacctgctgtcccgtttcacacggaatgagttcaacctggagagc
aaaagcaccatcggtgtggaattcgccacccgcagcatccaggtggacggcaagacgata
aaggcccagatctgggatacagctggacaggagcgctacagagccatcacttcagcgtac
taccggggagcggtgggggctctcctagtgtacgacattgccaagcatctgacctatgaa
aacgtggagcgctggctgaaggagctgagggatcatgctgataacaacatcgtcatcatg
ctggtgggcaacaagagtgacctgcgccacctcagggcagtgcccacagacgaggctcgc
gccttcgcagaaaagaatacgctatcatttattgagacatcggctttggactccactaat
gtagaagaggcgttcaagaacatcctcacagaaatccaccgaatcgtatcacagaagcag
atagctgacagatcagcacatgacgagtctccaggcaacaatgtagttgacatcagtgtc
ccccccaccaccgatgggcagaaaaacaaactgcagtgctgccaaagcctgtga
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