Coregonus clupeaformis (lake whitefish): 121533591
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Entry
121533591 CDS
T08357
Name
(RefSeq) fibrillin-2
KO
K23342
fibrillin 2/3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121533591
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121533591
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121533591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
EGF
TB
hEGF
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_MSP1_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
121533591
NCBI-ProteinID:
XP_041695606
LinkDB
All DBs
Position
20:complement(49128846..49195873)
Genome browser
AA seq
2885 aa
AA seq
DB search
MGAGKLARLLLGWAAVCWAAVHTAYGQAGAGDGGYQASRFTGKVDEREVQRVRRRGQETL
RGPNVCGSRFHSYCCPGWKTLPGGNQCIVPICRNSCGDGFCSRPNMCTCGSGQLSPSCGA
GAGAGVQSCNVRCMNGGSCQEDSCSCQKGYTGNHCGQPVCENGCQNGGRCIGPNRCACVY
GFTGPQCERDYRTGPCFTQVNNQMCQGQLSGIVCTKTLCCATIGRAWGHPCEMCPAQPHP
CRRGFIPNIRSGACQDVDECQAIPGLCAGGNCINTVGSYECKCPAGHRQSDTSHKCEDID
ECSTNPGVCDGGECTNTAGSYVCTCPRGYITSTDGARCVDQRVGTCFSALASGRCAGDLQ
GQYTKMQCCCDTGRCWASGQIPEMCPVRGSDEYRRLCIEGVPHGTGNGGFPHGGFPNGGG
SNGNGYSYGYKLNPNGPNGNGHHGIGGGGQGGGGNGFGGNGGGRNIVSLNETVDVCKHFT
NLCLNGRCIPTPTSYRCECNMGYRQDVRGECIDVDECVSNPCVNGDCVNTPGSYHCKCHE
GYQGTPTKQACIDIDECIVNGVMCRNGRCVNTGGSFQCICNAGFELTPDGKNCIDHDECA
TTNMCLNGMCINEDGSFKCICKPGFALAPNGRYCTDIDECQTPGICMNGRCINSEGSFRC
ECPPGLAIDVDGRVCVDTHMRTTCYGAIKMGTCSRPFPGAVTKSECCCASPEHGFGEPCQ
PCPARNSAEFQAVCSSGIGITADGRDINECALDPDICQNGMCENLRGSYRCICNIGYESD
SSGKNCVDINECLVNRLLCDNGLCRNTPGSYTCSCPKGFVFKPDSETCEDINECDSSPCV
NGICRNIAGSFNCECSHGSKLDSTNTICVDSMKGTCWLNVQDGRCEVNINGATLKSECCS
TLGAAWGSPCERCEIDTACSRGFARMKGVNCEDINECEVFPGVCTNGRCVNTQGSFLCEC
AEGLTLDGSGRTCVDVRSEQCYMKWHEDECGEPLPGRYRVDMCCCSVGAAWGIDCEECPK
ADTPEYKAICPRGPGFANRGDILTGRPFYKDVNECKVFNSLCSHGTCRNTIGSFKCRCSS
GFALTMEERNCTDIDECHISPDLCGHGTCVNTPGSFECECFEGYESGFMMMKNCMDIDEC
ERNPLLCRGGACLNTEGSYECECPPGHQLSPDGSSCEDVNECQLSDNLCKNGHCVNMVGN
YQCSCDTGYQVTPDRQGCVDIDECTIMNGGCDTHCTNSEGSYECSCSEGYALMPDLRTCA
DIDECEDTPDICDGGQCTNIPGEYRCLCYDGFMASMDMRTCIDVNECELNPNICLHGDCE
NTKGSFICHCQLGYFVKKGSTGCTDIDECEIGAHNCDMHAACVNVPGSFKCRCRDGWVGD
GIKCVDLDECSTEEHNCNLNADCVNTPGSYRCACKEGFNGDGFSCSDMDECADNVNLCEN
GQCLNAPGGYRCECEMGFTPTEDSKACQDIDECNFQNICVFGTCQNLPGMFRCVCDDGYE
LDRSGGNCTDINECADPVNCINGLCVNTPGSYLCNCPPDFELNPTGVGCVDTRVGNCFLD
TLARGDGGISCSAEIGVGVTRASCCCSLGGAWGNPCELCPPINSTEYKTLCPGGEGFRPN
PITVILEDIDECQELPGLCQGGNCVNTFGSFQCECPAGYYLNEETRICEDIDECTAHIGI
CGPGTCYNTLGNYTCVCPPEYMQVNGGNNCMDMRKSVCYRNFNDTCENELSFNMTKKMCC
CAYNVGKAWNKPCEACPTPATSEYQLLCGNQAPGFIIDIHTGKPIDIDECREIPGICANG
VCINQIGSFRCECPMGFSYNNILLICEDIDECNSGDNLCQRNANCINIPGSYRCECSPGF
KLSPSGACVDRNECQEIPNVCSHGECIDTQGSYRCLCHNGFKATADQTMCMDIDECDRQP
CGNGTCKNTVGSYNCLCFPGFELTHNNDCMDIDECSALVGQVCRNGQCINSLGSFQCLCQ
DGYELTPDGKNCVDINECVSLPGTCSPGTCQNLDGSFRCICPPGYEVQNDQCIDINECEV
EPNICQFGTCTNTPGSFQCICQNGFVLSDNGRRCLDTRESFCFTRFESGKCSVPKAFNTT
KAKCCCSKMPGEGWGDPCELCPRESEASFKSLCPYGHGSTPGLGDAREDMNECLDNPGVC
VNGICINTDGSFRCECPFGYNLDYTGVNCVDTDECSIGNPCGNGTCTNVVGGFECSCHEG
FEPGSMMTCEDINECSLNPLLCAFRCVNTFGSYECMCPSGYVLRDDHRMCRDQDECSEGL
DDCESKGMSCKNLIGTFMCICPLGMQRRPDGDGCMDLNECRAKPGICKNGRCENTVGSYR
CVCNEGFQSSSTGTECIDNRQGFCFTEVLQTMCQQGSTNRNSVTKSECCCNLGRGWGPQC
ELCPLPGTVQYKRMCPLGPGYTTDGRDINECTVMPDLCKNGQCINTIGSFRCHCNVGYTT
DFTGTSCVDMDECSASPKPCNFLCKNTEGSYLCSCPRGYTMQPDGKTCKDLDECSTKQHN
CQFLCVNTIGGFTCKCPAGFTQHQTACIDNNECNGQSSVCGSRASCVNTPGSFNCDCGKG
FSLDTTGLECEDVDECGSNHRCQHGCQNMMGGFRCGCPQGYVQHYQWNQCVDENECSGAS
VCGSASCYNTLGSFKCVCPSGFDFEQGGSGCQDVNECSMGSNPCSFGCSNTDGGYLCGCP
GGYYRAGQGHCITGQGFQDQYSSEGDDEDSLSPEACYECKINGDVGKKGRHRRHAAGDND
LKEVSMASVDIQESIPMNLSLASLHNKEPLLELLPALEPLEHHVRYVITHGNQGEHFRLL
ERRDGKSVLRLGRKPPPPGSYRLEIASLPLFGPWRLRQLEDEHDSDYLLGEIGDALRIKL
HIHLH
NT seq
8658 nt
NT seq
+upstream
nt +downstream
nt
atgggagcaggaaagctggcccggttgctgctgggatgggcggccgtttgctgggccgca
gtccacacggcgtatggccaggcaggagcgggagatggagggtaccaagccagccgcttc
acggggaaggtggatgagagggaggtgcaaagggttcgccggagaggacaggagacacta
agagggcccaatgtgtgtggctctcgcttccactcctactgttgccctggctggaagact
ctgcctggagggaaccagtgtattgtcccgatctgccgtaactcgtgcggtgatggcttc
tgctccagacccaacatgtgcacctgcggcagcggccagctctcccccagctgtggggcc
ggagccggggccggagtgcagagctgtaacgtcaggtgtatgaacggaggcagctgccaa
gaggactcctgctcctgtcagaagggctacaccggcaaccactgtggacagcctgtgtgt
gagaatggttgccaaaacggagggcgctgtattgggcccaacagatgtgcctgtgtctac
ggcttcactggcccgcagtgcgagagagactaccggaccgggccctgcttcacgcaggtc
aacaaccagatgtgccagggccagttgagtggcatcgtgtgcaccaagacattgtgctgt
gccaccatcggacgggcatggggacacccctgtgagatgtgccccgcccagcctcacccc
tgtcgccgaggcttcatcccaaacatccgcagcggcgcatgccaggatgtggatgaatgt
caggccatcccggggctgtgtgcaggaggtaattgtatcaacacagtgggctcctatgag
tgtaaatgtccagcgggccaccgccagagtgacaccagccacaagtgcgaagatattgac
gagtgcagcactaacccaggtgtttgtgatggaggtgaatgcaccaacacagccggcagc
tacgtctgcacctgtccccgtggttacatcaccagcactgacggtgccagatgtgtagac
caacgtgtgggcacgtgtttctcggcgttggcgagtgggcgctgtgcaggcgacctgcag
ggccagtataccaagatgcagtgctgctgtgacacaggccgctgctgggcttctggacag
atccctgagatgtgccctgtcagggggtccgatgagtacagaaggctgtgcatcgagggg
gttccccatggcacaggtaatggaggtttcccccacggaggcttccccaatggtggtggc
agcaacggtaacggttacagctacggctacaaactcaaccccaacggacctaacggcaat
ggtcaccatggcattggaggagggggacagggaggaggaggaaatggtttcggaggaaac
ggtggggggcgtaatatcgtgtcactcaatgagaccgttgatgtgtgtaaacatttcacc
aacctgtgtttgaacggccgctgtatccccaccccgaccagctaccgctgtgaatgtaac
atgggctacagacaggatgtacgcggggagtgtattgatgtggatgagtgcgtcagcaac
ccctgtgtcaatggagactgtgtcaacacacctggatcgtaccactgcaagtgtcacgaa
ggctaccagggcacccccaccaaacaggcctgcattgatattgacgagtgcatcgtgaac
ggagtgatgtgtcgtaacggacgttgtgtcaacactggcggaagcttccagtgcatctgc
aacgctggctttgaactcactcctgatggaaagaactgcatagatcatgatgagtgtgcc
accaccaacatgtgtctcaatggaatgtgtatcaatgaggatggtagcttcaagtgtatc
tgtaaacctggctttgccctggcacctaacggacgctactgcacagacattgatgagtgc
cagaccccaggcatctgtatgaacggacgctgtatcaactccgagggctccttccgctgt
gagtgcccaccgggcctggccatcgacgtggacgggagagtgtgtgtggacacacacatg
cgcaccacctgctacggcgccatcaagatgggcacgtgctcgaggcccttccctggcgcc
gtcaccaagtctgagtgctgctgtgccagtcctgaacacggcttcggagagccctgccag
ccctgccctgcccgcaactcagctgagttccaggctgtgtgcagcagtgggattgggatc
accgctgacggcagagacatcaatgagtgtgccctggacccagacatctgtcagaacggc
atgtgtgagaacctgagagggagctaccgctgcatctgtaacatcggttatgagtccgac
tccagcggaaagaactgcgtggacatcaacgagtgtctcgtgaaccgtctgctgtgtgac
aacggcctgtgtagaaacacccccggcagctacacctgctcctgtcccaaaggctttgtc
ttcaaaccagactctgagacctgcgaagatatcaacgagtgtgactccagcccgtgtgtc
aacggaatctgccgcaacatcgccgggtccttcaactgcgagtgttcccatggcagcaag
ctagactccaccaacaccatctgcgtggacagcatgaagggaacatgctggctgaacgtc
caagatggccgctgtgaggtcaacatcaacggcgccacgctaaagtctgagtgctgctct
acgctgggagcagcctggggcagtccctgtgaacgctgcgagatcgacactgcctgttcc
agggggttcgcgcgtatgaagggagtcaactgtgaagacatcaatgagtgtgaggtgttc
ccgggggtgtgtaccaacgggcgctgtgtcaacacccagggctccttcctctgtgagtgt
gctgagggtctcaccctggacgggagcggacgcacctgcgtggacgtgcgtagcgagcag
tgctacatgaagtggcacgaggatgagtgtggtgagccgctgcccgggcgctaccgagtg
gatatgtgctgctgctcggtgggcgcagcctggggcatcgactgtgaggagtgtcccaag
gcggacaccccggagtacaaggccatctgcccccgaggaccaggcttcgccaaccgagga
gacatcctgactggcagacccttctacaaagatgtgaatgagtgtaaggtgttcaacagc
ctgtgttctcacggaacgtgtcgcaacaccatcggcagcttcaagtgccgctgcagcagt
ggcttcgccctcaccatggaggagaggaattgcaccgatattgacgaatgtcatatctct
ccggacctgtgtggccacggcacctgcgtgaacacccctggcagcttcgagtgtgaatgc
ttcgagggctacgagagtggcttcatgatgatgaagaactgcatggatattgatgagtgt
gagaggaacccactgctgtgtcgaggaggcgcctgtctgaacacagaggggagttacgag
tgtgaatgtcctcccggacaccagctgagccccgacggttcctcctgcgaagatgtgaac
gagtgccagctgagtgacaacctgtgtaagaacggccactgtgtcaacatggtggggaac
taccagtgctcctgtgacacgggctaccaggttacaccagacagacagggctgtgtggat
attgatgagtgtaccatcatgaacggaggctgtgacacacactgtaccaactccgagggc
agctacgagtgcagctgtagtgagggctacgcgctcatgcccgacctcaggacctgcgct
gacattgatgagtgtgaggacacccctgacatctgtgacggaggccagtgcaccaacatc
cctggagagtaccgctgtctctgctatgacggattcatggcctccatggatatgaggacc
tgtattgatgtgaatgagtgtgagctgaaccctaacatctgtctgcacggggactgtgag
aacaccaagggatccttcatctgtcactgtcagctggggtactttgtcaagaagggctcc
accggctgcacagatattgatgagtgtgagattggagcccataactgtgacatgcatgct
gcctgcgtcaacgtccccggaagcttcaagtgtcgctgtcgtgacggctgggtgggagac
ggcatcaagtgtgtggacctggacgagtgttccaccgaggagcacaactgcaacctcaac
gcagactgtgtcaacacccccggctcctaccgctgtgcctgcaaggagggcttcaacggg
gacggcttctcctgttcagatatggatgagtgtgctgacaacgtcaacttgtgtgagaac
ggccagtgtctgaacgctccggggggctaccgctgcgagtgtgagatgggcttcacccct
actgaggacagcaaggcctgccaggatatcgacgaatgtaacttccagaacatctgtgtg
tttggaacgtgtcagaacctaccggggatgttccggtgtgtgtgtgacgacggctacgag
ctggaccgcagcggaggaaactgcactgacattaacgagtgtgcggaccctgtgaactgc
atcaacggcttgtgtgtgaacacaccaggaagctacctgtgtaactgccctccggacttc
gagctcaatcctactggagtgggctgtgtggacacacgagtgggcaactgtttcctggac
acgttggcgcgtggcgacggtggcatctcctgcagcgctgagattggcgtgggcgtcacc
cgcgcctcctgctgctgctccctgggaggagcctggggaaacccctgtgaactctgccca
cccatcaactccacggagtacaagacactgtgtcccggaggagagggcttcagacctaac
cccatcactgtcatcctggaagacattgatgagtgccaggagctgccaggcctgtgccag
ggtggtaactgtgtcaacaccttcggcagcttccagtgcgagtgccccgcaggctactac
ctcaacgaggagacacgcatctgcgaggatattgatgagtgcacagcccacattggaatc
tgtggtcctggtacctgctacaacaccttggggaactacacctgcgtgtgtcctcctgag
tacatgcaggtcaacggaggaaacaactgcatggacatgaggaagagcgtgtgttaccgc
aacttcaacgacacgtgtgagaacgagctgtctttcaacatgaccaagaagatgtgctgc
tgtgcctacaacgtgggcaaggcctggaacaagccctgtgaagcctgccctacccctgcc
acctcggagtaccagttactgtgtgggaaccaggctcctgggttcatcatagacatccac
acgggcaagcccatcgatattgatgagtgtcgagagatcccgggtatatgtgccaacgga
gtgtgtatcaaccagataggaagcttccgctgtgaatgtcccatgggcttcagctacaac
aatatactgctcatctgtgaagatattgacgagtgtaacagcggagacaacctgtgccaa
cgcaacgccaactgtatcaacatcccagggagctaccgctgcgagtgctcaccaggcttc
aagctgtcccccagcggagcctgcgtggaccgcaacgagtgccaggagatccctaacgtg
tgtagccacggagagtgtatcgacacccagggcagctaccgctgtctctgccacaacggc
ttcaaggccacagccgaccagaccatgtgcatggatattgatgagtgtgacagacaacca
tgtgggaacggaacctgtaagaacacagtgggctcctacaactgtctctgcttccctggc
ttcgagctcacgcacaacaatgactgcatggacattgatgagtgcagtgcgttggtgggt
caggtgtgtaggaatggccagtgtatcaacagcttgggatccttccagtgtctctgtcag
gatggctacgaactcacccccgacggaaaaaactgtgtcgatatcaatgagtgtgtgagt
cttcctgggacatgctctcctggaacctgtcagaacctggatggatccttccgctgtatc
tgcccacctggatacgaggtgcagaacgaccagtgtatagatatcaacgagtgtgaggtg
gagcccaatatctgccagtttggcacatgtaccaacaccccaggaagcttccagtgtatc
tgccagaatggcttcgtcctgtctgacaatgggcgccgctgtttggacacaagagagagc
ttctgtttcacccgctttgagtcaggcaagtgttctgtgcccaaagccttcaacaccacc
aaggccaagtgctgctgcagcaagatgccaggcgagggctggggagacccctgcgagctg
tgcccacgcgagagcgaggcgtcctttaaaagcctgtgtccctacggccatggatccacg
cctggacttggggacgcccgtgaggatatgaacgagtgtctggacaacccaggcgtctgt
gtgaacggtatctgtatcaacacggacggatcgttccgctgcgagtgtcccttcggctac
aacctggactacaccggggtcaactgtgttgacactgatgagtgctctataggaaacccc
tgtggtaacgggacctgtactaatgtggtgggaggctttgagtgctcctgtcatgaaggc
ttcgaacctggctccatgatgacctgtgaagatatcaacgagtgttctctaaaccccctg
ctgtgtgccttccgttgtgtcaacacctttggttcctacgagtgcatgtgtccctcgggt
tacgtgctgcgagacgaccaccgcatgtgcagagaccaggatgagtgttctgagggtttg
gatgactgtgagtccaaaggcatgtcctgtaagaacctgattggcaccttcatgtgtatc
tgcccccttggcatgcagcgcagacctgacggagatggctgcatggacctgaatgagtgt
cgcgcgaagcctggcatctgtaagaacgggcgctgtgagaacacagtgggaagctaccgc
tgtgtgtgcaacgagggcttccagtccagctccactggaacagagtgtatcgataaccga
cagggcttctgtttcaccgaggtgctccaaactatgtgccagcagggctccaccaacagg
aacagtgtcaccaaatctgagtgctgctgcaacctcgggcgcggctggggaccccagtgt
gagctctgcccgctgcctggcaccgtgcagtacaagaggatgtgcccactgggacccggg
tacaccaccgacggcagagacatcaatgagtgcacggtgatgccagacctgtgtaagaac
ggccagtgcatcaacaccatcggatcgttccgctgccactgcaacgtgggttataccacc
gacttcaccggcacctcctgcgttgatatggatgagtgttccgcgtctcccaagccctgt
aacttcctgtgtaagaacacagagggcagctacctgtgctcctgccccagaggatacacc
atgcagcctgacggaaagacctgcaaagatctggatgagtgttccactaagcagcataac
tgtcagttcctgtgtgtcaacaccatcggagggttcacctgcaagtgtcctgcaggcttc
acccagcaccagaccgcctgtatcgacaacaatgagtgtaatgggcagagcagtgtatgt
ggctccagagcctcctgtgtcaacacccccggcagcttcaactgtgactgtgggaaaggc
ttctctctggacacaactggcctggagtgtgaagatgtggatgagtgtggtagtaaccat
cgctgtcagcacggctgtcagaacatgatgggagggttccgctgtggctgtcctcagggc
tatgtacaacactaccagtggaaccagtgtgtagatgagaacgagtgttcgggtgcgtct
gtgtgtggctcggcctcctgctacaacaccctgggtagctttaagtgtgtgtgtccgtcc
ggctttgactttgagcagggagggagcggctgccaggatgttaatgagtgttccatgggc
agtaacccctgcagcttcggctgctccaacacagacggaggatacctgtgtggctgtcct
ggaggatactacagggctggacagggtcattgtataacgggtcagggcttccaggaccag
tatagctcagagggagacgatgaggacagtctgtctccagaggcctgctacgaatgtaag
atcaacggagacgtcggcaagaagggccgacacagacgtcacgctgctggggacaacgac
cttaaggaggtgagcatggccagtgtggacatccaggagtccatccccatgaacctgagc
ctggcctcactgcacaacaaggagcccctgctggagctgctgcctgccctggaacccctg
gagcaccacgtgcgctatgtcatcacccacggcaaccagggcgagcacttccgcctgctg
gagcgccgcgacgggaagagcgtgctgaggttgggcaggaagccgcctccccccggctcc
taccgcctggagatcgccagcctgcccttgttcgggccgtggcgcctccgacagctggag
gatgaacacgacagcgactatctgctgggagagataggagacgccctacgcatcaagctg
cacatccacctgcactga
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integrated database retrieval system