Coregonus clupeaformis (lake whitefish): 121533682
Help
Entry
121533682 CDS
T08357
Name
(RefSeq) microtubule-associated protein 1S-like
KO
K10429
microtubule-associated protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121533682
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121533682
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121533682
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121533682
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
121533682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAPB1_N
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
121533682
NCBI-ProteinID:
XP_041695760
LinkDB
All DBs
Position
20:17314348..17360142
Genome browser
AA seq
1394 aa
AA seq
DB search
MAIQRTEEIEAMENANLTSHPGFSNDKYSILVIVGEHSGTGFVDYMVAEIKRGIRSWDVD
LTFCNLDEQLKLFVSRHSAFFSEEIKGQRTLQHSGDVLDTKVVGNPSHELVCSEVRRLIS
DVSRHKLLVLAGQCVEEAGDLVLQTGCFSLSDFIQIFADEEIGELLSSADPTQKASLTLS
CPNSGVWKNSVLEKHNLQDFIDIKTNPPSVLPEMEGLQEFTEYLSESLEPQSSFELLEPP
STVGFLKLSRPCCYVFPGGRGDSAFFAVNGFNILVNGGSNPRSCFWKLVRHLDRVDSLLL
THIGTDNLPGVNSLLQRKAVELEDEQSADSQINEDWMKNLISPEIGIVFLNAPERLKSFQ
GDPEELRSCDQVALTLQHLERLTINPEPLSRSNGPTIEPVILFQKMGVGRLELYVLNPVK
GSKELEALMKTWPGNGSNMKGSEIPLPCLVSICALLVWHPASPQEKIIRVLFPGCTPQAK
ILEGLDKVKHLEFLKHPAVSLRDLEASKSDKQPKRAESRESLKSLLKDSRPSSALLKDKL
GRGDVKKQDVKTKPKGPSDITPKEKKEGEEKSKLKDGDAKQRPPKPEKLMTKKEPLKDEK
KEGKKRDERASAGVAKKDEIVEKKKEPIKKEPLGLKPKKDVKPDPKKEIKKEVKPEEKKP
TKPLSKDVKKVTTGPSLGNTEAKKPLGKNGTLKKDAIPKKDSLNKGAKSKTGKMPENPKA
LASEGDADRSKMSTPEDMTAEFEKLRAENGESEKKTAVVVSTTGNNEGMVQPATENRSRE
NAEKRDMLESPEKFRCMETLPNPEKALGTTSPLAKTPKSDRSVYFDLTPTEYRLLDGALR
NGQEDACASSDEKTLELVSPADSAPNSAGHTPFHQSPEEDAQGSGEDSSLGGRVPSLGFE
DCHVMGSCRNSEVGSLRGNLENSTSSQDKQSSLLTLSPFMLPDSVSANITSMPAEIGSPH
STEVDESLSVSFEQVLPSIDESPKGDHMDRSYSNGHFADPDPKMGMSLPLRTCHNMRPPG
DGSEERLTGLQGLLPDVPHDVDLCLVSPCEFKHPKSPENQQQHLSPGLATGSPRELSGNS
DHSQELAKPQSVINSDRHSPQGQETPPTSASESLNTATDSDIPPGTEDCPSITADMDSDE
DSGSFPPHHPHDHPSSHSSNRGAQHSSQDPPPAPMKDLPPLPPQPGACMADPEADAPSKT
LKSAAAKTKKPAGVTQRITSATSTALNSKTKTGSTTGTLKTTSSLDTRPSSRNTTNGSRP
GTARSTSSGSVGSKACAAGGAPVYLDLAYLPSGCASTTIDVEFFRRLRSSCYIVSGNEPL
KESVMRPILDALLEGKTAWPDVQVTLIPTFDSLTMHEWYQETHERQGELGITVLGSNSTV
AMQEETFPACKVEF
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggcgatacaacgaactgaagagatcgaagcaatggaaaatgcgaacctaacttcgcat
cctggcttcagcaacgacaagtattctatcctcgtcattgtcggtgaacatagtgggact
ggatttgtggactacatggttgcggagataaagagaggcatccgctcatgggatgtggac
ctgacattctgtaacctggacgagcagctcaagctctttgtgtctcgacactctgccttc
ttctcggaagaaataaaaggccagaggacgctgcagcacagtggagacgttctggacacc
aaggtggtggggaacccatcccatgagttggtctgctcagaggtgcgccggcttatatct
gatgtgtctcgccacaagttgttggttcttgctggacaatgtgtcgaagaggcaggagac
ctggtcctacaaacaggatgtttctctctcagtgacttcattcagatatttgctgatgag
gagattggagagttattgagctcggcagaccccacacaaaaagctagcctcacgctgagt
tgtcccaactctggggtgtggaagaactcagtgttggagaagcacaacctacaagacttc
attgacatcaaaacaaacccgccatcagtgctacctgaaatggaaggtctgcaagagttc
acagaatacctctcagagtccctggagccacagtcttcttttgagctgctggagcccccc
agtactgtgggcttcctaaaactctcccgcccctgctgctacgtatttccaggtgggaga
ggagactccgccttctttgctgttaacggtttcaacatcctggtcaacggtgggtccaat
ccacgctcctgtttctggaaactggttagacatctggacagagtagactccctactcctc
acccacatcggtactgacaatcttccaggggtgaacagtcttctccaaaggaaagcggta
gaactggaggatgaacagtctgccgactctcagatcaatgaggactggatgaaaaatcta
atttcccctgagattgggatcgttttccttaatgctccagagagattgaagtcattccag
ggtgatcccgaagaactgcggagctgcgatcaggtggcactcacgttgcagcaccttgaa
aggctaacaatcaatccagagcctcttagtcgctcaaatggacccaccattgagcctgtt
atacttttccagaagatgggagtcggtcgtctagagctgtacgttcttaacccagtcaaa
ggcagtaaagagcttgaggctttgatgaagacctggcccggcaatggatccaacatgaaa
ggctcagagatacccctgccttgcctcgtctccatctgtgctctactggtgtggcatcct
gccagtcctcaagagaagatcattcgagttctcttccctgggtgtactccgcaggctaag
attcttgaaggacttgacaaagtaaagcatctagaattcctgaaacaccccgccgtgagc
ctcagggaccttgaagcatccaaatcagataaacaaccaaaacgtgcagagagtcgggag
agccttaagtccctgctcaaggattcaagacctagcagtgccttgctgaaggacaaactt
ggacgtggggacgttaagaaacaagacgtgaagaccaagcccaagggcccaagtgacatt
actcctaaagaaaagaaggaaggggaagagaagtcaaaattgaaggatggggatgctaaa
caaagacctccaaaacctgaaaagcttatgacaaagaaagaacctttaaaggatgagaaa
aaagaaggtaaaaagagggatgagagagcctctgcaggtgttgccaaaaaggatgagatt
gtggagaaaaagaaagaaccaattaagaaagaacctcttggtctaaaaccaaagaaagat
gtcaaacctgatccaaagaaagagatcaagaaggaggtaaagccagaggagaagaaacca
acaaaacctctcagcaaggatgtcaaaaaagtgacaactggaccttcattaggaaacaca
gaggcaaaaaagcccttaggcaagaatggaactttgaagaaggatgcaatccccaagaaa
gactcattgaacaagggggcaaagtcaaagacgggtaaaatgccggagaatccaaaagct
ttggcctctgaaggggacgcggatcgttccaagatgtcaacgcctgaagacatgacagcg
gaattcgagaagcttagagcagaaaatggagagtcagagaaaaagactgctgttgtagtg
agcactacaggtaacaatgaaggaatggtgcaacctgcaacagagaatagatcaagagaa
aatgcagagaagagggacatgttggaaagtccagaaaagttccgctgcatggagacactc
ccaaatccagagaaggccctgggaaccacttcacctcttgcaaaaactcctaaaagtgac
cgcagtgtgtactttgatctcacaccaactgaatacaggcttcttgatggggccctgaga
aatggacaagaagatgcatgtgccagctcagatgagaagactttagagttggtctcccct
gctgactcagcccctaatagcgctgggcatacccctttccaccaatcacctgaagaggat
gctcagggctctggtgaggacagtagtctcgggggaagggtgcctagccttgggtttgaa
gactgccacgtcatgggttcttgcaggaactctgaggtaggctccttgagggggaaccta
gaaaactctacatcatcacaggacaagcaatcaagccttttgacactgagtccctttatg
ctgcctgactctgtttccgccaatattacctctatgcctgctgaaatcggttccccacac
tcgacagaagttgatgagtctctttccgtgtcttttgaacaggtgctcccatcgattgat
gagtcacccaagggagaccatatggacaggtcctactcgaatgggcattttgctgatcct
gaccccaaaatggggatgtccttaccgttgaggacatgtcataacatgcgtccaccaggg
gacggctcagaggaacgccttactggacttcagggtcttctccctgacgttccccatgac
gtcgacctctgcctggtctcaccctgtgaattcaagcacccaaagtccccagagaaccaa
caacagcatctgtctccggggctagccacaggtagcccgcgagagctctcaggaaacagc
gaccactcccaggagctagctaagccacaaagcgtcattaatagtgatcgacattcgcca
caaggccaggagactccacccacatctgctagtgagtccctcaacacagccacagattca
gacatacccccagggactgaagactgcccctccatcactgcagacatggactctgatgag
gattctgggagtttcccaccccaccatccacacgaccatcccagctctcactcctccaac
agaggagctcaacattcctctcaggaccctcccccagccccaatgaaggacctgcccccc
ttgccgccccagcccggtgcctgcatggctgaccctgaggctgatgctccaagcaagacc
ttaaagagcgccgccgcaaaaaccaagaaaccagccggtgtcacacagaggataacgtca
gccaccagtacagctctgaacagcaagaccaagactggcagcacaactggtacattgaag
accacctcaagtcttgacacaaggccttcatcccgcaataccactaatggctccagacct
gggactgcaaggtcaacttcatcaggttctgtgggcagtaaggcctgtgcagctggaggg
gccccagtttacttggacctggcttatctcccatctggttgtgcctctaccaccattgac
gtggagttcttccgacgcctgcgctcctcctgctacatcgtcagtggtaacgagcccctg
aaggagtctgtcatgagacccattcttgacgccctactggaggggaagaccgcctggccc
gatgtgcaggtgaccctgatccccacttttgactcactgacgatgcacgagtggtaccag
gagacccacgagaggcagggggagctgggcatcaccgtgctgggcagcaacagcactgtg
gccatgcaggaggagaccttccctgcctgtaaagtggagttctga
DBGET
integrated database retrieval system
