Coregonus clupeaformis (lake whitefish): 121533713
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Entry
121533713 CDS
T08357
Name
(RefSeq) syntaxin-3 isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121533713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121533713
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121533713
Membrane trafficking [BR:
cclu04131
]
SNARE
Syntaxin (Qa)
Stx-PM
121533713
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
121533713
Exosomal proteins of other body fluids (saliva and urine)
121533713
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
FlaC_arch
PI_PP_C
YtxH
DUF6827
COG6_N
Relaxase_C
ArAE_1_C
Motif
Other DBs
NCBI-GeneID:
121533713
NCBI-ProteinID:
XP_041695823
LinkDB
All DBs
Position
2
Genome browser
AA seq
323 aa
AA seq
DB search
MKDRLEQLKATCDNDDEEVEIAIDNAAFMDEFFSQIEDIRNSIDKIDENVSEVKKLYSVI
LSAPTSDQKTQDDLEAVTNDIKKMANNARNKLKTIERNLESEEEERISADMRIRKSQHAV
LSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKATTDEELEEMLEGGNSAVFTSGIM
DSGISKQALSEIEARHKDIVRLESSIKELHDMFVDIAMLVESQGDIVNNIEVQVSKAVDH
IVVAKTETKKAIQYQSKARKGGMIERIENNMDQSVGFVERAVADTKKAAKFQQEARRKTI
IIAVVCTVLAVLILAIILSQTVG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgattggaacaacttaaagcgacatgtgacaatgacgatgaagaagtggaa
attgccatcgacaatgcagcttttatggatgagtttttctctcagatcgaggacatcagg
aacagtattgataagattgatgagaatgtgtctgaagtcaagaagctctactcagtcatc
ctgtctgcccccacatcagaccagaaaacacaggatgacttggaggctgtcaccaacgac
atcaagaagatggctaacaacgcccggaacaaactcaaaaccatcgagaggaatctggag
tctgaggaagaggagaggatttcagccgacatgcggattcgcaaatcacagcatgcagtg
ctgtccaggaagtttgtggaagtgatgaccaagtacaatgaggcccaggtggacttcagg
gagaggagtaaaggacgcatccagagacagctagagatcactggcaaagccacaacagac
gaggagctggaggagatgttagagggtggaaactcagccgtcttcacttcagggatcatg
gactctgggatctcgaagcaggctctcagtgagattgaggcgcgacacaaagacattgtg
cgtctagagagcagcatcaaagagctgcacgacatgtttgtagacatcgccatgctggtg
gagagccagggtgacatagtaaacaacatagaggtgcaagtgtctaaagctgtggaccac
atagtagtggctaagactgagaccaaaaaagccatccagtaccagagcaaagcacgcaag
ggcggaatgattgagaggattgagaacaacatggaccaatcggtgggcttcgtagagcgg
gcggtagctgacactaagaaagccgccaagtttcagcaggaggcccgtcgtaagacaatc
attatagcagtggtctgtactgtgcttgctgtcctcatcctcgccatcatcctatcacag
acagtagggtaa
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integrated database retrieval system