Coregonus clupeaformis (lake whitefish): 121533754
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Entry
121533754 CDS
T08357
Symbol
ccdc50a
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121533754 (ccdc50a)
Membrane trafficking [BR:
cclu04131
]
Autophagy
Other autophagy associated proteins
Others
121533754 (ccdc50a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
121533754
NCBI-ProteinID:
XP_041695894
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All DBs
Position
20:13374353..13428665
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AA seq
656 aa
AA seq
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MAEFPIDQNKLPGVKEVCRDFAVLEDHCLAHNLQEQEIESHLASNVHKSRLVQQDVALAK
QLQEEEDRRAQAKAKRQHRDIERSDNEIAQEIQEELVRQAEQQRKQEEKDAAIARKLQEK
EMKEERKRQKQLEANFEEEYYEDKGAIRAPLDLDDKPKPRSNSHSPESDPLTPGSRRDLS
PEYGSFEPSRTRYPRYDPVEPSTSGSSRYPEHHLESRGEGSRSKHGDPYPEDHLSNSRGK
HGGRYPDYHHPTEGRSRGKGGQRSRDPQGSQSTFYQDSHDPRRHRGEEGERVVRRKERPI
RPPPPSHNPVERDKAWERAREKEREWEKDRQREPRRNKERESDAPRHEERSRDGQRHGQR
SRDREHSRDKHREKDRHRERTKSRERGLDEDYDEPIPSSHSRAWTVGGEEAPGPGDDGKW
GPMARLYSGPSELCEEEARRSPRPGGMGRERGERRGHRDPGEGPSMGTERSYTHPAPREP
GRIVQGGPGGRGAVVVGGEYGMGEATQGIAKLDLREQEILDMEVARKLQEEEVKASKMDK
RAAQVAQDEEIARLLMEQEKMEYKKSREKEKQGMRLEERRPEGGDFKPSSEEVVRPRSRE
EEYQRPRNHQKAARPPQPHPHDYENVETSYRYSESHYSSRAPARPEAAYKGTYYRQ
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatttcccatcgatcaaaacaaactgcccggagtaaaagaagtgtgtcgagac
tttgctgtgctggaggaccactgcctggcccataacctccaggagcaggaaatcgagagc
cacttggcatccaacgtccacaagagccgtctggtgcagcaggacgtagcattggccaag
cagctgcaggaggaggaggaccggagggcccaagccaaggccaagagacagcaccgggac
attgagcgcagcgacaatgagattgcccaggagattcaggaggaattggtgcgacaggcg
gagcagcagcgcaagcaggaggagaaggatgcggccatcgctcgtaagctgcaggagaag
gagatgaaggaggagaggaagagacagaagcagctggaggccaactttgaggaggagtac
tacgaggataaaggagccatccgagcccctctggacctggatgacaaacccaaacctcgt
tcgaactcccactcgcccgagtcggatccccttaccccgggctcacgacgcgacctctcc
cctgagtacggttcttttgagcctagcaggaccagatacccccgatacgaccctgtagag
cctagcaccagtggtagttccagataccccgagcaccatttagagagtaggggagagggt
agcaggagcaagcatggagacccataccccgaggaccacctctccaatagcagggggaaa
catgggggcaggtacccagactaccaccaccccaccgagggtagaagtagagggaaaggg
ggccagaggagccgagacccccaggggtcccagtccaccttctaccaagacagccatgat
cccaggagacacagaggggaggagggggagagggtggtgaggaggaaggagaggcccatc
cggcctcccccgccgtcccacaaccctgtggagagagacaaggcctgggagagagcgagg
gagaaagaaagagagtgggagaaagacaggcaaagagaacccaggagaaacaaggagagg
gagagcgacgccccgagacacgaggagagatcgagagacggacagagacacgggcagcga
tcgcgagaccgagagcatagccgagacaaacacagagaaaaagacagacaccgagaaaga
accaagagcagggagcgaggtctggatgaagactatgacgagcccatccccagtagccac
agccgggcctggactgttggtggggaggaggcccctggccctggggatgatgggaagtgg
gggcccatggccaggctctactctggccccagtgagctgtgtgaggaggaggccagaagg
agcccccgccccggcgggatggggagagaaaggggggagaggagaggtcacagggaccct
ggggaggggcccagcatgggcacggagcgctcctacacgcaccccgctcccagggagcca
ggtcgtatcgtgcaaggaggaccagggggtcgtggagcggtggtagtaggaggggagtac
gggatgggcgaggccacccagggcatcgccaagctggacctgagggagcaggagatcctg
gacatggaggtggcccggaaactacaggaggaggaagtcaaggcaagcaagatggacaag
cgcgcagcccaagtggctcaggatgaggagatagcccggctgctgatggagcaggagaag
atggagtacaagaagtccagagagaaggagaagcaggggatgaggctggaagagaggagg
ccagagggaggagacttcaagccaagctcagaggaggtagtgcgtcccaggtcacgagag
gaggaataccagaggcccaggaaccaccaaaaggctgccaggcctcctcaacctcatcca
catgactatgagaatgtggagaccagctacaggtactcagagagccactactcttcccgc
gctccagccagacctgaggctgcttacaaaggtacctattacaggcagtga
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