Coregonus clupeaformis (lake whitefish): 121533772
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Entry
121533772 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121533772
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121533772
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121533772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
Prok-RING_4
zf_RING_Vps8_fungal
DUF7027
PHDvar_NSD
RINGv
zf-RING_16
zf-RING-like
zf-RING_4
PHD
Hemotin
zf-C3H2C3
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
121533772
NCBI-ProteinID:
XP_041695940
LinkDB
All DBs
Position
20:complement(8023497..8105419)
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AA seq
381 aa
AA seq
DB search
MLFSLGMLMLSATQIYTIFTVQLFAFLNLLPVEADISAYTFDNKTGNFDDLPARFGYRLP
SDGLKGFLIGARPENACEPIDPPPIRDNLTGAFIVLIKRFDCNFDIKVLNAQKAGYKAAM
VHNVDSDDLISMGSNDLDILKQIDIPSVFVSEETANSLKEDYTYDKGGHVVLMPDFSLPL
EYYLIPFLIIVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPIHKYNKGDAYDVC
AICLDEYEEGDKLRVLPCSHAYHNKCVDPWLTKTKKTCPVCKQKVVPSAGDSDSDSEEGD
SEPDENEVSESTPLLRSLASTSGHSFGTVSGASRSEPDQESSEYEDDHLDTSDDSEITVE
TVTVETVVQEPGPNDHDPFRA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgctgttctccctggggatgctgatgctgtccgccacacagatctacaccatcttcact
gtgcagctcttcgccttcctcaacctgctgcccgttgaggctgacatttctgcctacaca
tttgacaacaaaacgggaaactttgatgacctgcctgcacggtttgggtaccggttgccc
agcgatggactcaagggctttctgattggtgcacggcccgaaaatgcctgcgagcccatc
gacccgccccctattcgggacaacctcactggtgccttcatcgtgctcatcaagcgcttc
gactgcaactttgacatcaaggtccttaacgcccagaaggccgggtataaggcagcgatg
gttcacaacgtggactctgatgacttaatcagcatgggatccaatgatctggatattttg
aagcagatagacattccatcagtgtttgtgagcgaagagactgccaactccctgaaagag
gactacacatatgacaaggggggtcatgtggtcctcatgccggacttcagcctgcctctg
gaatactacctgatccccttcctcatcatcgtgggaatctgcctcatcctcatcgtcgtt
ttcatgatcacaaagtttgtccaggacagacacagggctcggagaagccgtctgcgcaag
gaccagctgaagaaactccccattcacaagtacaataaaggggatgcctacgatgtgtgt
gccatatgcctggatgagtatgaggagggagacaagctccgggtcctgccctgctctcac
gcttaccacaacaagtgcgtggacccctggctgaccaagaccaagaagacgtgtcccgtg
tgcaagcagaaggtggtcccctctgcgggcgactcagactccgactcggaggagggcgac
agcgagcccgatgagaatgaggtgtcagagagcaccccgctgctgcgctccctggcctcc
accagcggccactcctttggcaccgtgtcgggcgcctcgcgctccgagcccgatcaggag
tcatccgagtacgaagacgaccacctggacaccagcgatgacagcgagatcactgtggag
actgtcaccgtggaaacggtggtgcaggagcctggtcccaacgaccacgacccgttccgc
gcctga
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integrated database retrieval system
