Coregonus clupeaformis (lake whitefish): 121533813
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Entry
121533813 CDS
T08357
Symbol
dnajc6
Name
(RefSeq) putative tyrosine-protein phosphatase auxilin isoform X1
KO
K09526
DnaJ homolog subfamily C member 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121533813 (dnajc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121533813 (dnajc6)
03110 Chaperones and folding catalysts [BR:
cclu03110
]
121533813 (dnajc6)
04131 Membrane trafficking [BR:
cclu04131
]
121533813 (dnajc6)
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121533813 (dnajc6)
Chaperones and folding catalysts [BR:
cclu03110
]
Heat shock proteins
HSP40 / DNAJ
121533813 (dnajc6)
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
121533813 (dnajc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTEN_C2
DnaJ
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
121533813
NCBI-ProteinID:
XP_041696017
LinkDB
All DBs
Position
20:27871900..27944360
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AA seq
992 aa
AA seq
DB search
MSLLGGYKKKPCSYDGYESLQLVDSSGGVNNGGGRRSGIGGGLVSAATLGGPKAGPLWEN
DCSTMDSSGPPSPDMDANYGGGLLDMVKGGAGKFFSNFKDNLKDTLKDTSTKVMHQVATY
TKGELDIAYITSRIIVMSYPAEALQIGNQNHVEDMRSFLDSRHADHYTVFNLSQRNYRGA
KFSNRVSECNWPSHQAPSLHNLFAVCKNMHNWLKQNPKNVCVITCSDGRAPSGVLVCAMF
CFCHLFTNPVPAMQLLSAKRPGSGLWPSHRRYIGYVCSMVSEKPSLPHSKPLVVKAVTMS
PVPCFNKQRIGCRPFCEILIGETKIFSTAQDYERMREHRVQEGKVVFPLGVNVQGDVVIS
VYHMRNTIGGRLQAKVSNTQIFQIQFHTGFIAPGTTVLKFTKPELDACDSPEKYPQLFHV
LVDIEVESTDKQKDLTPPWEQFPNKDLIPNVLFSCHQEHQDALAIAEPSRSHGGPDGRPH
GEDSEPSDDEMLSLSSQQSHARGERPGGAQAGTRDPKRPEQPQAPPSAPPPPPEEVDLLG
LDGVAVNPPCPSPQPPTTNTTTDLLGDLFGASPQPRSGHNSAQSTPQKIAPHSTSPCPSP
VLDPFGASPMPKPQELMGSFLGPAGNLGNPGQPGPLLHAAHSPSPTMQNTGMGRSSPVPP
TTPVVTIQQPPNAVGGWDWNKPAAPGGGFSMGSKSASTSPTGSVNNTPTHQAKPNTLDPF
ADIGNLGGSLGGGSGFSSKPTTPTGTTPAFPPMGSPSRPPPSPQHGGGWQANTGFPSWKP
GGGGGGGGVGQAGWQPQPQSQGGPPPQAKPSPSHSMPHTSPSNRPNYNISFSAMGGGPAP
NAAGKQQPNMGTKPKVATANFDDLLSGQGFAGAKKKEGPRTIAEMRKEEMAKEMDPEKLK
ILDWIEGKERNIRALLSTMHTVLWEGETRWKPVGMADLVTPEQVKKVYRKAVLVVHPDKA
TGQPYEQYAKMIFMELNDAWSEFDSQGQKALY
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgggtggctataagaaaaagccctgcagttacgatggctatgaatcttta
cagttggtcgatagcagcggaggcgtcaataacggaggagggagacgcagcggaatcggc
ggaggcttggtatcagcagcaaccctaggaggaccgaaggcaggcccactgtgggagaac
gactgcagcaccatggacagctcaggtcctccatctccagatatggacgcgaactatggc
ggaggcctgctggacatggtgaagggtggagccggcaagttcttcagcaacttcaaggat
aacctgaaggacactctaaaggacacctccaccaaagtcatgcaccaggtggccacatac
acaaaaggagagctggacattgcctacatcacatcacgaatcatagtgatgtcatatcct
gcagaggcgttgcagatcggcaaccagaaccatgtggaggacatgcgctccttcctggac
tcacggcacgctgaccactacaccgtcttcaacctgtcacagcgcaactaccgcggcgcc
aagttctccaaccgggtctcagagtgcaattggccgtcccaccaggctcccagcttgcac
aacctgtttgcggtgtgtaagaacatgcacaactggctcaaacagaaccctaagaatgtg
tgtgtcatcacctgctcggacggccgtgctccgtcgggtgtgctggtctgtgccatgttc
tgcttctgccacctcttcaccaacccagtgcccgccatgcagctgctcagcgccaagaga
cccggctcaggcctctggccctcgcaccggaggtacataggctatgtgtgcagtatggta
tcagagaagccctccctgccacactccaagcccctggtggtcaaggcggtcaccatgagt
ccagtaccttgcttcaacaaacaacgcatcggctgcagacccttctgtgagatcctcata
ggggagaccaagatcttttctactgcacaggactatgagaggatgagagagcacagggtc
caggaggggaaggtggtcttccctctaggtgtgaatgtccagggtgatgtggtcatctct
gtctatcatatgaggaacaccatcggaggacgactgcaggccaaggtgtccaacacccag
atattccagatccagttccacacaggcttcattgctccagggaccactgtgttaaagttt
acaaagccggagctggatgcgtgtgactctccagagaagtaccctcagttgttccatgtg
ttggtggacatcgaggtggagagtactgacaaacagaaggacctgacccctccctgggaa
cagttccctaataaagacctcatccccaatgtactgttctcctgtcaccaggaacaccag
gacgcactcgccatcgcagagccaagccggtcccatggcggtccggacggtcgtcctcac
ggggaggacagcgagccgtctgatgacgagatgctgtccctgtccagccagcagagccac
gctagaggagagagacctggaggggctcaggctggcaccagggaccccaagagacccgag
cagccccaggcccccccctctgctcctcctcctcccccagaagaggtggacctcctgggc
ctggatggggtggcagtgaaccccccctgcccctcgccccagccccccaccaccaacacc
accacggacctcctgggggatctgtttggggcctccccccagccaagaagtgggcacaac
tcggcccagtccaccccacagaaaatagcccctcactccacctccccctgcccgtctcca
gtgttggacccgtttggggcgagtccaatgcccaagccccaggagctgatggggtccttc
ctgggaccagcaggtaatcttggtaacccggggcagcctggccccctcctgcatgccgct
cactcgccatcccccaccatgcagaacactggcatgggccgcagctccccagtcccgccc
accacacctgtagtcaccattcagcagcctcccaacgccgtgggaggatgggactggaac
aaacctgcagctccaggaggtggtttcagtatgggcagcaagtcagccagtacaagtcct
actgggtcggtcaacaacactcccacacaccaggccaaacccaacactctggaccccttt
gctgacatcggaaacctggggggaagtctgggaggaggctctgggttctccagtaagccc
accacccctacaggcaccacccctgccttcccccccatgggctccccctcacggcctcct
ccctcgccccagcacggtgggggctggcaggccaacacaggcttcccctcctggaagccc
ggtggtggtggtggtggtggaggtgtagggcaggctgggtggcagccccaaccccagagt
cagggtggtccacccccccaggccaagcccagccccagccactccatgccccacacctcc
ccctccaacagacccaactacaacatcagcttctctgccatgggaggaggacctgctccc
aatgcagccgggaaacaacagcccaacatgggtaccaagcccaaagttgcaacggctaac
tttgatgacctgctgtctggccaaggctttgctggagccaagaaaaaggaaggtcccagg
acaatagcagagatgaggaaggaggagatggctaaagagatggaccccgagaaactcaag
attctggactggatcgaggggaaggagcgtaacatccgggccctgctgtccaccatgcac
acagtgctgtgggagggggagacccgctggaagcctgtaggcatggctgacctggtgacc
ccagagcaggtcaagaaggtctaccgtaaagctgtgctggtggtccatccagacaaggcc
actggacagccctatgaacaatatgccaagatgatttttatggaactgaatgacgcctgg
tcagaatttgacagccaaggacaaaaagcactctactga
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