Coregonus clupeaformis (lake whitefish): 121533819
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Entry
121533819 CDS
T08357
Symbol
sgip1a
Name
(RefSeq) SH3-containing GRB2-like protein 3-interacting protein 1
KO
K20065
SH3-containing GRB2-like protein 3-interacting protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121533819 (sgip1a)
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
121533819 (sgip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
muHD
Adap_comp_sub
ATG29_N
Motif
Other DBs
NCBI-GeneID:
121533819
NCBI-ProteinID:
XP_041696036
LinkDB
All DBs
Position
20:28520512..28606031
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AA seq
701 aa
AA seq
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MAEELCIGWFRIVAGSLEIEECKSAIMMEGLKKRTRKAFGIRKKEKGDKDNDSTGSPDRD
GGSQKRANGAAVNGFSDEIDWDRYNTPTVDDEGYSLRPDEEEVPGSPGPKPPKEHFFSSS
ESEGEEDLHKKFKIKIKPLPAESANCLAPSVDELKASIGNIALFPSPLRSSPRRSPGLMN
KDCSEEIQVARPRRSAPIAAPTLAAPALQAPRSKKSPAAPVAAPVPEDATALFGPPLETA
FREQKTEVGISERVACDVWGAPLPESESLSPDFSFTRTFPKGTPPPLPPKNVPTSPPPTS
SPSAAAGASSPVRPATPSAPSAVFSSPTPPPPPPRPSSRPKLPPGKPSKGDMSRPFSPPV
SHSSSPPSIATLARAESTSSISSNNSLSAATTPTVENDQPSLVWFDRGKFYLTFEGCSRG
PSPLTMGTQDTLPVAAAFTETVNAFFKGANPNKCVVKITGEMVLSFPAGITRHFANNPSP
AVLTFSITHYSWLEHVLPNPQLLCCDTATTPNPDCKTFWVNMPNLMTHLKKVAEQKPQAT
YYNVDMLKYQVSAQGLTSTPLNLAASWRCEPTSTDLRIDYKYNGGAMTTPVALNNVQFLI
PVDGGVTKLQAVLPPAAWNAEQQRILWKIPDISQKSENGGIGSLLARFQLSEGPSKPSPL
AVQFTSEGSTLSGCDIELAGPGYRFSLIKKRFAAGKYLADN
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagagctgtgtattggctggtttcgcattgttgcaggctccttggagatagag
gaatgcaaatctgcaatcatgatggaaggattgaaaaagcgtaccaggaaggcctttggg
atacggaagaaagagaagggagacaaggacaatgactccacggggtcccctgacagagat
gggggttcacagaagagggccaatggagcagctgtcaatgggttctctgatgagatcgac
tgggacagatataacacccctacggtggacgatgaaggttacagtctcaggccagacgag
gaggaggtgccaggatcacctggccccaaaccccccaaagaacacttcttctcctccagc
gagtcggagggagaggaggacctccataaaaagtttaagatcaagatcaaaccgttacca
gcggaaagtgccaactgtttggccccgtcggtagatgaactgaaagcctccataggcaac
atagcgctgtttccctctcctctgaggagtagtccgagacgtagcccggggttgatgaat
aaggactgtagtgaagagatacaggtagctcggccaagacgttctgcacccattgcagcc
cccacgttagcagccccggcgctacaggcccccagaagtaagaaatccccagcagcccca
gtagcagccccagtaccagaggacgctacagccttatttgggcctcccctggagacagcc
ttcagagagcagaaaactgaagtgggtatatctgagcgggtggcgtgtgacgtgtggggt
gctcctctacctgagtctgagtcactgagcccagacttctctttcaccagaaccttcccc
aaaggaactccgcctccgcttccacccaagaatgtcccgacctccccccctccgaccagc
tccccctctgcagctgccggggcgtcctctccggttcgtcctgctacaccgtcagctcca
tcagctgttttcagcagccccaccccgccccctccccctccacgcccctcctcacgaccc
aaactgcctcctgggaaacccagcaagggggacatgagccggcccttcagtcccccggtc
agtcactcgtccagccccccttccatcgccaccctggcccgggccgagagcacctcctct
atctcctccaacaactccctgagtgcagccaccacccccaccgtcgagaatgaccagcct
tccctggtttggtttgacagagggaagttttatttaacctttgaaggctgttccaggggc
cccagccctctcaccatggggacccaggacacccttccggtggcggcagcttttacagag
acggtcaatgccttcttcaaaggagccaaccctaacaagtgtgttgtgaagatcacaggc
gagatggtgctgtcgtttccagcggggatcacccggcactttgccaataacccgtcccct
gccgtgctaaccttcagcataacccactacagctggctggagcatgtgctgcctaacccc
cagctactctgctgtgacaccgccacaacacccaaccctgactgcaagaccttctgggtg
aacatgccaaacctgatgacccatctaaagaaggtggccgagcagaaaccccaggccaca
tactacaatgtggacatgctcaaataccaggtatcagcgcagggcctcacatcgaccccc
ctgaacctagcagccagttggcggtgtgaacccaccagcacggacctccgaatagactac
aaatataacggcggcgccatgacaacgcccgtggcgctcaacaacgtccagttcctgatc
cccgtagacggaggggtcaccaagctacaggccgttcttccccccgctgcatggaacgca
gagcagcagagaatcctgtggaagattcctgatatttcccagaaatctgaaaatggaggc
attggctcattgttggcccggttccagctctcggagggtcccagtaagccctctcccctg
gcggtccagttcaccagcgaaggcagcactctgtcaggttgtgatatagagctggctggc
cctgggtaccgcttctcactcatcaagaagaggttcgctgcaggaaaatacttggcagac
aactga
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