Coregonus clupeaformis (lake whitefish): 121533839
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Entry
121533839 CDS
T08357
Name
(RefSeq) catenin delta-1 isoform X1
KO
K05690
catenin (cadherin-associated protein), delta 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121533839
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Motif
Pfam:
Arm
ARM_ARMC5
HEAT_EZ
Atx10homo_assoc
ARM_UBP24_USP9X-Y
Motif
Other DBs
NCBI-GeneID:
121533839
NCBI-ProteinID:
XP_041696063
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Position
2:17587752..17622078
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AA seq
940 aa
AA seq
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MEPCESAAALLESVREQEVQFEQLTRALEEERRRVRLPSPPSHPLPHTQNGRLGEADIER
LKLSEGYINGTQYRMVDPAHDALDESCTPEDDSQEAHSVFSDDGTNGRRAGNVMKVITSR
TVLPSDSMSIDGGLSVSGMGGYSATLDRTYRQGGGGDYPTATVPRNYHYGPAGGYDDYRS
APPSEAYASLSRGTRVDDRYRPADGYRTLDSGYRAPSRQQMDPYVAQPQVGRGVRGVGSA
LELGGMRYAHQGHYGVEDDQRSLGYDDMEYSMAPPTMHPGYGTMPRLGPGPGGLDRRRLR
SCEDTLDGDMGGVDPYTWGVNMAMERGSMASLDSTLRKGPPTSWRQPELPEVIAMLNYRL
DPVKTNAAAFLQHLTFKNDKVKSEVRRLKGIPALVSLLDNPKKDVHHSACGALKNISYGR
DHDNKIAIKNCDGIPALVRLLRKTREQDLTDTITGTLWNLSSHDSVKMEIVDHALHTLSD
EVMVPHSGWERGSDGGEESLKPRHLEWETALTNTAGCLRNVSSERSEARRKLRECTGLVD
SLMYIVQSQINRKDVDNKLVENSVCLLRNLSYQVHREIPGCERYLEAAPLNQGPVPGSNK
ASCFSSRKGKDEWFSKGKKDADDGSADQVDIPKRTTPAKGYELLFQPEVVRVYTSLLRES
QNPSVLEAAAGAIQNLCAGRWTYGRYIRATVRLEKGLPMMAELLAHGNDRVVRAMSGALR
NLAIDNRNRELLGKHAVPHLVADLPGGQSQSARPLSEETVVSVLSTLTEVLGNSLEAAKT
LRASQGIERLVLINKDGKRSEREVRGAGQVLQLIWGHKDLRRPLEKDGWKKTDFMVNLNP
PANGPSTRTNGTYEDTTMPMLDKGTKRDMIPLNDLGPEAYSTLDQRERRHSLDNSLDTTD
TLQRGVYGGRKGSLPLLDSYDEKLMVCITQGELPQPYHCY
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggagccgtgtgagagcgctgcggccctcctggagtcggtgagggagcaggaggtgcag
tttgaacagctgaccagagcgctggaggaggagaggaggagagtgcgcctccccagcccc
ccgtcccaccccctcccccacacacagaacgggcgcctgggggaggcagacatagaacga
ctgaaactgagtgagggatacattaatgggacacagtacaggatggtggacccagcgcat
gacgctctagacgagagctgcacaccagaagatgattcacaggaagcacactccgtcttc
tcagacgatggaaccaatggacggcgggcagggaacgtgatgaaggtgatcacctcacgt
accgtcctgccctctgattcgatgtccatcgacggaggactatccgtctcgggcatgggt
ggttacagtgccactctggaccgaacctacaggcagggtggagggggtgactaccccaca
gccacggtccccaggaactaccactacggccccgcgggggggtacgacgactacaggagc
gccccgccctccgaggcctacgccagcctgagcagaggcacacgcgtggacgaccgctac
agacctgcggatgggtacaggaccctggactctgggtaccgcgcccccagcagacagcag
atggacccctacgtagcccagccccaggtggggcgaggggtgaggggtgtgggcagtgcc
ctggagctggggggcatgcgctacgcccaccagggccactatggcgtggaggatgaccag
aggagtctgggatatgacgacatggagtacagtatggctcctcccaccatgcatccagga
tacggcaccatgccacgactaggcccaggccctggtggactggacagacgcaggctcagg
agttgtgaggacactttggacggggacatgggaggagtcgacccctacacctggggcgtc
aacatggcgatggagaggggaagtatggcatcattggacagtaccctgaggaagggcccg
cccacttcctggagacagccagagcttcctgaggtcatcgccatgttgaactaccgactg
gacccggtcaaaaccaacgctgctgccttcctccagcacctcaccttcaagaatgacaag
gtgaaatcggaggtgcgtcgtctaaaggggatccctgctctggtctcgttgctggacaac
cccaagaaggacgtacaccactcggcctgcggggcgctcaagaacatctcatatggacga
gaccacgacaacaagatcgccatcaagaactgtgacggcatccctgccttagtcaggcta
ctgaggaagaccagagagcaagacctcacagacaccattacaggcacattgtggaaccta
tcgtctcacgactctgtgaagatggagatcgtggaccacgcgttacacaccctctctgac
gaggtgatggtgccgcactctggctgggagagaggaagtgacggaggagaagaaagcctc
aaaccacgacacctggagtgggagacggccctcaccaacacagctggctgtctgaggaac
gtgagctcagaacgtagcgaggccaggcggaagctgagggagtgcacgggattggtggac
tcactcatgtacattgtccaatcacagatcaaccgcaaagatgtggacaacaagttggtg
gagaacagtgtgtgtctgctgagaaatctgtcctatcaggttcaccgggagattcccggc
tgcgagcgctacctggaggccgcgcccctaaaccagggccccgtccccggatccaacaag
gccagctgcttcagctcaaggaagggcaaagatgagtggttttccaaaggtaagaaagat
gcggatgacgggagtgcggaccaggttgatatcccaaagaggacgacgcctgccaaaggc
tatgagctgctgttccagccagaggtggtgcgtgtgtacacatctctgctgagagagagc
cagaacccctctgtactggaggctgcagccggggccatacagaacctgtgtgccggacgc
tggacttatggtcggtatatccgggccacggtacgtctggagaagggcctcccgatgatg
gcagagctgctggctcatgggaacgaccgtgtggtcagagccatgtccggagccctgagg
aacctggccatcgacaaccgcaaccgcgagctgctcggtaagcacgctgtgccccacctg
gtggcagacctgccgggtggccagagccagtcggcacgacctctgtctgaggagacggtg
gtgtctgtactgagcacgctcactgaggtgctgggcaacagcctggaggccgccaagacc
ctcagggcctcccaaggcatcgagagactggtgctcatcaataaggacggtaagcgctct
gagcgggaggtacgtggggcaggccaagtgttacagctgatctgggggcacaaggatctg
cggcgccccctggagaaggacggctggaagaagactgacttcatggtgaacctcaacccc
cccgccaacggcccctccacacgcaccaacgggacctacgaggacactaccatgccaatg
ctagacaaagggacgaagagagacatgattccactgaatgacttaggccctgaagcctac
tctacactggaccagcgggagaggagacactctctggacaactccctcgacaccacagac
actttacagcgtggggtgtatgggggcagaaagggttccctgcctctgttggactcctac
gatgaaaaactgatggtgtgcattacccagggtgagctgccccagccctaccactgctac
tga
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