Coregonus clupeaformis (lake whitefish): 121533904
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Entry
121533904 CDS
T08357
Name
(RefSeq) CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like
KO
K00781
N-acetyllactosaminide alpha-2,3-sialyltransferase (sialyltransferase 6) [EC:
2.4.3.6
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00513
Various types of N-glycan biosynthesis
cclu00514
Other types of O-glycan biosynthesis
cclu00515
Mannose type O-glycan biosynthesis
cclu00533
Glycosaminoglycan biosynthesis - keratan sulfate
cclu00601
Glycosphingolipid biosynthesis - lacto and neolacto series
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
121533904
00515 Mannose type O-glycan biosynthesis
121533904
00514 Other types of O-glycan biosynthesis
121533904
00533 Glycosaminoglycan biosynthesis - keratan sulfate
121533904
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
121533904
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121533904
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.3 Sialyltransferases
2.4.3.6 N-acetyllactosaminide alpha-2,3-sialyltransferase
121533904
Glycosyltransferases [BR:
cclu01003
]
Terminal extension
Sialyltransferase
121533904
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_29
YhiY
Motif
Other DBs
NCBI-GeneID:
121533904
NCBI-ProteinID:
XP_045061399
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All DBs
Position
20:complement(33791880..33890547)
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AA seq
364 aa
AA seq
DB search
MRVMKPTRHLLLVLCPMLVLGFLYYSSGRLHLRGWGQKSQYDKQGFLLKLGGNLPLELMY
KYGNLSEGVCKPGYAAAKMSTIYPTFTKPAPMFLDPNFRRFSKISKFFPPFGMKTQEKII
DNILTATKRYGLGDELDSQSCKKCIIMGNGGILANKSMGVRIDEYDVVARLNEAPVSGYE
KDVGSKTTMRITYPEGAIQKTEHYEQDSLFVLSAFKALDFKWLRSMIFKERLRSTEGFWK
SVARHVPREPSEMRILNPYFIQEAAFRFIGLPHNNGQMGRGNIPTLGTVAITMALHNCDE
VAVAGFGYDMSTPHAPLHYYEKIRMAAIKESWTHNISKEKEFLIKLVKAGVIQDLTNGLC
GSGC
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcatgaagccaacccgtcacctgctcctggtgctctgtcccatgcttgtcctg
ggcttcctttactactcctctgggaggctgcacctgaggggctggggacagaaatcacag
tatgacaaacagggattcttgctgaagctgggtggtaatctacctttggagctgatgtac
aagtatgggaatctcagcgagggagtctgtaagcctggctacgcagctgccaagatgtcc
accatctatccaacgttcactaaaccagctcccatgttcctcgatccaaactttagacga
ttctccaagatcagcaaatttttcccaccttttggaatgaaaacgcaagaaaagatcata
gataatattctgacagccacaaagcgctatggtctgggagatgagctggacagtcagagt
tgtaagaagtgcatcatcatgggaaatggtggtattctggccaacaagtctatgggtgtg
aggattgacgagtacgatgtggttgcaaggttgaacgaggccccagtgtctggctatgaa
aaggatgtgggctccaagaccaccatgcgtatcacctacccagagggagccatccagaag
actgaacactacgaacaggactccctcttcgtcctctctgccttcaaagctctcgacttc
aaatggctgcggtccatgatctttaaggagaggctgcgtagcacagaagggttctggaag
tctgtggcccgtcatgtccccagggagcccagtgagatgaggatcctcaacccttacttc
atccaggaggctgccttcaggttcattggcctgccacacaacaacggacagatgggaaga
gggaatattccgacactggggacggttgccataacaatggccctccataactgtgatgag
gtagccgtggctggatttggctatgacatgagcacccctcatgcccccctacactactac
gagaagatcaggatggcggccatcaaagagtcctggactcacaacatttctaaggagaag
gagttcctgattaagctggtgaaggctggggttatacaggacttgaccaatgggctctgt
ggctcaggatgctga
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