Coregonus clupeaformis (lake whitefish): 121533927
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Entry
121533927 CDS
T08357
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C
KO
K22038
volume-regulated anion channel
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121533927
Ion channels [BR:
cclu04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
121533927
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_R13L1-DRL21
LRR_At5g56370
LRR_5
TEX29
LRR_9
Motif
Other DBs
NCBI-GeneID:
121533927
NCBI-ProteinID:
XP_041696224
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Position
20:53605575..53622317
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AA seq
795 aa
AA seq
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MIPVTEFRQFSEQEPAFRVLKPWWDVFTDYLSVVMLMIGVFGCTLQVVQDKIICLPQRTS
IANQTIALPNKTELVSPVVSQDVHEMMGLKTNLDLQQYSFINQMCYEKALHWYAKYFPYL
VLIHTLIFMVCSNFWFKFPGSSSKIEHFISILGKCFDSPWTTRALSEVSGENPEEKDNKK
NSASRAILNVSVEGNLDNLEKTQSLKSIPEKIVVDKPTASALDKKEGEQAKALFEKVKKF
RLHVEEGDILYVMYVRQTVLKVFKFLLIIAYNSALVSEVQITVKCSVDIQDMTGYKHFSC
NHTMAHLFSKLSYCYLCFVAVYGFTCLYTSYWLFYRSLKEYSFEYVRQETGIDDIPDVKN
DFAFMLHMIDQYDPLYSKRFAVFLSEVSENKLKQLNLNHEWTPEKLRQRLLTNHNNRLEL
QLFMLSGLPDTIFEVTELQSLKLEIINNVTIPASIAQLENLQELSLYQCCLKIHTTATSF
LKENLKVLRVKFDDSRELPHWLYHLRNLEELYLIGSLSPDASKNVVLESLRELKNLKTLS
LKSNFTKIPQSIVDVSSHLQRLYVYNDGTKLVMLNNLKKMVNLTELELVHCDLERIPHAV
FSLTNLQELDLKENNLHSIEEIVSCQHLHKLTCLKLWHNSICYIPEHIKKLGSLERLYFS
HNKIEILPSHLFLCNKLRYLDLSNNDIRFIPPEIGVLQSLQYFSVTCNKIENLPDELFFC
KKLKTLKLGKNTLSLLSPKISYLVLLTHLELKGNHFELLPPELRFCRALKRGGLVVEDVL
FETLPSDIRDKMKAE
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtgacggagttccggcaattctcagagcaggagccagcattccgggttctg
aagccctggtgggatgtgttcacagactacctctctgtggtcatgctaatgatcggagtg
ttcggatgcaccctacaggtggtgcaggacaaaataatctgccttccacagagaacgtca
atagcgaaccaaacaatagccttaccaaataaaaccgagctggtctcacctgttgtgtcg
caggatgtgcatgagatgatgggcctgaaaaccaacctggaccttcaacagtacagcttc
ataaaccagatgtgctacgagaaagccctgcactggtacgccaagtacttcccttacctg
gtcctcatacacaccctcatcttcatggtgtgtagcaacttctggttcaagttcccaggc
tccagctctaagatagagcatttcatctccatcttgggaaagtgcttcgactccccctgg
actaccagagctctgtctgaggtgtctggagagaacccagaggagaaggacaacaagaag
aacagtgccagcagagcgatcctcaacgtgtctgtagaggggaacctggacaacctggag
aagacccagtccctcaaatccatcccagagaagatcgtagtggacaagcccacagccagc
gccctggataagaaagaaggagaacaagccaaagctctgtttgagaaggtgaagaagttc
cgcctgcacgtcgaggaaggggacatcctctatgttatgtatgttcgccagactgttctc
aaggtgttcaagttcctcctcatcatcgcgtataatagtgctttagtctctgaggtgcag
atcacagtgaagtgcagtgtggacatacaggacatgacgggatataagcatttctcctgt
aatcacaccatggcccacctgttctctaagttgtcatactgttacctgtgcttcgtggct
gtgtacggattcacctgcctctacacttcctactggctcttctaccgctctctgaaggag
tactcctttgaatacgtgcggcaagaaacgggaatcgatgacatcccagacgtgaagaat
gactttgccttcatgctgcacatgatcgaccagtacgacccactgtactccaagaggttc
gcagtgttcctgtctgaggtcagtgagaacaaactgaaacagttgaacctgaaccacgag
tggacaccagagaagctacgtcagagactgctgaccaaccacaacaacagactggagctg
cagctcttcatgctgtctgggctcccggacaccatcttcgaggtgacagagctccagtcc
ctgaagctagagatcatcaacaacgtaaccatcccagcctccatcgcccagctggaaaac
ctccaggagctgtctctgtatcagtgttgtttaaagatccacaccacagccacttccttc
ctcaaggagaaccttaaggtgctcagggtgaagtttgatgacagcagggagctgcctcat
tggctgtaccacctgcggaatctagaggagctctacctcattggctcactgagtcctgac
gcttctaagaatgtggttctggagtctctgagggagctgaagaatctgaagaccctgtcg
ctcaaaagtaactttacaaagatcccccagtccatcgtggacgtgtccagccacctgcag
aggctgtacgtttacaacgatggcactaagctggtgatgctcaacaacctgaagaagatg
gtgaacctgactgaactggagctggttcactgtgacctggaacgcatcccacatgctgtc
ttcagcctcacgaacctacaggagttggacctgaaggaaaacaacctgcactccattgag
gagatagtcagctgccaacacctccacaagctgacgtgcctgaaactctggcacaatagt
atctgctacatccccgagcacatcaaaaagctgggcagcctggagcgcctatactttagc
cacaacaagatagagatcttgccctcgcacctgttcttatgcaacaagcttcgttacctg
gacctgtccaacaacgacatccggttcattccgccggagatcggcgtcctacagagtctt
cagtacttctctgttacgtgcaacaagatcgagaacctcccagacgagctcttcttttgc
aagaagctcaaaaccctcaagctgggcaagaatacgctgtcattgctctcaccaaagatc
tcatacctggttctattgacacacctggaactgaagggcaaccattttgagctcctgcct
ccagagctacggttctgccgggcgttgaagcgtggcggcctagtggtggaggacgtcctg
tttgaaaccttgccttctgatatcagagacaaaatgaaggctgagtga
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