Coregonus clupeaformis (lake whitefish): 121533929
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Entry
121533929 CDS
T08357
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C-like isoform X1
KO
K22038
volume-regulated anion channel
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121533929
Ion channels [BR:
cclu04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
121533929
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GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_R13L1-DRL21
TEX29
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
121533929
NCBI-ProteinID:
XP_041696225
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Position
20:53563001..53579777
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AA seq
793 aa
AA seq
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MIPVTEFRQFSEQQPQFRVLKPWWDVFTDYLSVVMLMIGVFGCTLQVRQDKIICLPQKMS
MPNQTILLPNKTAVPPDVHEMMGRKTNLDFQQYSFINQMCYEKALHWYAKYFPYLVLIHT
LIFMVCSNFWFKFPGSSSKIEHFISILGKCFDSPWTTRALSEVSGENPEEKVLLDNKKSR
ASRAILNVSVEGNLDNLEKTQSLKSIPEKIVVDKPTASALDKKEGEQAKALFEKVKKFRL
HVEEGDILYVMYVRQTVLKVFKFLLIIAYNSALVSEVQFTVKCSVDIQDMTGYKHFSCNH
TMAHLFSKLSYCYLCFVAVYGFTCLYTSYWLFYRSLKEYSFEYVRQETGIDDIPDVKNDF
AFMLHMIDQYDPLYSKRFAVFLSEVSENKLKQLNLNHEWTPEKLRQRLLTNHNNRLELQL
FMLSGLPDTIFEVTELQSLKLEIINNVTIPASIAQLENLQELSLYQCCLKIHTTATFFLK
EKLKVLRVKFDDSRELPHWLYHLRNLEELYLIGSLSPDSSKNVVLESLRELKHLKILSLK
SNFTKIPQSIVDVSSHLQKLYIYNDGTKLVMLNNLKKMVNLTELELVHCDLERIPHAVFS
LTNLQELDLKENNLHSIEEIVSCQHLRKLTCLKLWHNNICYIPEHIKKLGSLERLYFSHN
KIEILSPHLFLCNKLRYLDLSNNDIRFIPPEIGVLQSLQYFSVTCNKIENLPDELFFCKK
LKTLKLGKNMLSLLSPKISYLVLLTHLELKGNHFELLPPELRFCRALKRGGLVVEDVLFE
TLPSDIRDKIKAE
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtgacggagttccggcagttctcagagcagcagccacagttccgggttctg
aagccctggtgggatgtgttcacagactacctctctgtggtcatgctaatgatcggggtg
ttcggatgcaccctacaggtgaggcaggacaaaatcatctgccttccccaaaaaatgtcc
atgcccaaccaaacaatactcttaccaaataaaactgctgtgccgccggacgtgcacgag
atgatgggccggaaaaccaacctggacttccagcagtacagcttcatcaaccagatgtgc
tacgagaaagccctgcactggtacgccaagtacttcccttacctggtcctcatccacacc
ctcatcttcatggtgtgtagcaacttctggttcaagttcccaggctccagctctaagata
gagcatttcatctccatcttgggaaagtgctttgactccccctggactaccagagctctg
tctgaggtgtctggagagaacccagaggagaaggtattgttggacaacaagaagagcaga
gccagtagagcgatccttaacgtgtctgtagaggggaacctggacaacctggagaagacc
cagtccctcaaatccatcccagagaagatcgtagtggacaagcccacagccagcgccctg
gataagaaggaaggagaacaagccaaagctctgtttgagaaggtgaagaagttccgcctg
cacgtcgaggagggggacatcctctatgttatgtatgttcgccagactgttctcaaggtg
ttcaagttcctcctcatcatcgcgtataatagtgctttagtctctgaggtgcagttcaca
gtgaagtgcagtgtggacatacaggacatgacgggatataagcatttctcctgtaatcac
accatggcccacctgttctctaagttgtcatactgttacctgtgctttgtggctgtgtac
ggattcacctgcctctacacttcctattggctcttctaccgctctctgaaggagtactcc
tttgaatacgtgcggcaagaaacgggaatcgatgacatcccagacgtgaagaatgacttt
gccttcatgctgcacatgatcgaccagtacgacccactgtactccaagaggttcgcagtg
ttcctgtctgaggtcagcgagaacaaactgaaacagctaaacctgaaccacgagtggaca
ccagagaagctacgtcagagactgctgaccaaccacaacaacagactggagctgcagctc
ttcatgctgtctgggctcccggacaccatcttcgaggtgacagagctccagtccctgaag
ctagagatcatcaacaacgtaaccatcccagcctccatcgcccagctggaaaacctccag
gagctgtctctgtatcagtgttgtttaaagatccacaccacagccactttcttcctcaag
gagaaactcaaggtgctcagggtgaagtttgatgacagcagggagctgcctcattggctg
taccacctgcggaatctagaggagctctacctcattggctcactgagtcctgactcttcg
aagaatgtggttctggagtccctgagggagctgaagcatctgaagatcctctcgctcaaa
agtaactttacaaagatcccccagtccatcgtggatgtgtccagccacctgcagaagctg
tacatctacaatgatggaaccaagctggtgatgctcaacaacctgaagaagatggtgaac
ctgactgaactggagctggtgcactgtgacctggaacgcatcccacatgctgtcttcagc
ctcacgaacctacaggagttggatctgaaggaaaacaacctgcactccattgaggagata
gtcagctgccagcaccttcgcaaactgacgtgcctgaaactctggcacaacaatatctgc
tacatcccagaacacatcaagaagctgggaagcctggagcgcctctacttcagccacaac
aagatagagatcttgtccccgcacctgttcttatgcaacaagcttcgttacctggacctg
tccaacaacgacatccggttcattccgccggagatcggcgtcctacagagtcttcagtat
ttctctgtcacgtgcaacaagatcgagaaccttccagacgagctcttcttttgcaagaag
ctcaaaaccctcaagctgggcaagaatatgctgtcgttgctctcaccaaagatctcatac
ctggttctattgacacacctggaactgaagggcaaccattttgagctcctgcctccagag
ctgcggttctgccgggcgttgaagcgtggcggcctagtggtggaggacgtcttgtttgaa
accttgccttctgatatcagagacaaaattaaggctgagtga
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