Coregonus clupeaformis (lake whitefish): 121533943
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Entry
121533943 CDS
T08357
Name
(RefSeq) plasminogen activator inhibitor 1 RNA-binding protein isoform X1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121533943
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121533943
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Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
IHABP4_N
TPR_8
Motif
Other DBs
NCBI-GeneID:
121533943
NCBI-ProteinID:
XP_041696245
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Position
20:complement(58637475..58648351)
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AA seq
426 aa
AA seq
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MPGHMQEGFGCAIANRFDQLFDDESDPFELLKEAENKKKEAPVPGAAKTAAQAAKLQKKE
SQKDRKVVPADKKDEPLAPVTLKKDGPGPRRMGPRREGQGPAGGPPREGQGEGRPPTDRP
PRTDRRPPRRFERPPGGEDKPAEGGEFSVEKPIGDRPMRGRGGGRGGVRGGRGRGMGRSD
GFDARGKREFDRHSGSDRSSQKGEEKRGGSGSHNWGTVKDEMGEHDQSNVTEETPEGEEP
RPADSENKENEVGEPKEVEPKEMTLDEWKAQQDKEKTKVEFNIRKANEGADSLWKKGYVL
HKSKDEKKADALIEAAVEAEAVAPKAEDDHHFRKPANDITAQLEINFGDLGRPSRGRGGP
RGGRGGRGRGEGRGEFRGEFREREPREPRERDGGAPTRPTRGGRTDRPSGVIVPNVDDPE
AFPALA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcccggacatatgcaagaaggtttcggctgcgccatagccaaccgattcgaccaacta
tttgacgacgagtcggacccgttcgagctgttgaaggaggcggagaacaagaagaaggag
gctcctgtccctggtgccgccaagaccgcggctcaagccgccaagctccagaaaaaggag
tcccagaaagacagaaaggtcgtccctgcagataagaaagatgagcctctggcacccgtg
actctgaagaaagatggacctggtcccaggaggatgggtcccaggcgtgagggtcagggc
ccagctgggggtccaccccgtgagggccagggcgagggccgcccccctacagacagaccc
ccccggacagacaggcggccaccacgccgtttcgagaggccccccggcggagaagataag
ccagccgagggaggagagttctctgtggagaagcccattggtgataggccgatgagagga
cgtggtggtggccgaggtggtgtccgtggcggcaggggccggggcatgggcaggagcgac
ggcttcgacgcccgaggaaagcgtgaattcgacagacacagtggcagtgatcggtccagc
cagaaaggtgaggagaaacgtggaggaagtggatctcacaactggggcaccgtcaaggat
gagatgggcgagcacgaccaatcgaacgtgaccgaggagacccccgagggagaggagcct
cggcccgctgactctgagaacaaggagaacgaggttggtgaacctaaggaagtggaaccc
aaggagatgactctggatgaatggaaggcccagcaggacaaggagaaaaccaaggtggag
ttcaacatccgcaaggccaacgagggagccgacagcctgtggaagaaaggatacgtgctg
cacaagtccaaggacgagaagaaagctgatgctcttattgaagctgcggtggaggctgag
gccgttgctcctaaggcagaggacgatcaccacttccggaagccggccaatgacatcaca
gcccaactggagataaactttggggaccttggtcgtccaagccgtggtcgtggtgggccc
cgtggcggcagggggggccgtgggcgcggagagggcagaggagagttccgtggagagttc
cgtgagcgtgagcccagagagccccgcgagcgtgatggtggagcccccaccaggccgact
cgcggaggacgcactgacaggccaagtggggtgattgtgcccaacgtggatgatccagag
gccttcccggccctggcctaa
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