Coregonus clupeaformis (lake whitefish): 121533962
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Entry
121533962 CDS
T08357
Name
(RefSeq) mast/stem cell growth factor receptor Kit isoform X1
KO
K05091
proto-oncogene tyrosine-protein kinase Kit [EC:
2.7.10.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121533962
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
121533962
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121533962
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cclu04090
]
121533962
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121533962
Protein kinases [BR:
cclu01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
121533962
CD molecules [BR:
cclu04090
]
Proteins
121533962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
C2-set_2
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
121533962
NCBI-ProteinID:
XP_041696292
LinkDB
All DBs
Position
20:58060027..58107297
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AA seq
1004 aa
AA seq
DB search
MEYHWVLFSVLIQLSFQTGSARPTITPRGLHLVIPLNAPLSLLCQGDQVVQWQREDRPKL
RGEERTNGASILKIPRAQPGHMGRYICLEERTGEQSSVYVYVKDPDNAFRKTIVFSILTR
AGDSASIPCLATDPGVVNLRLEPCHGSALPNGLHYAASLERGIVIYDTKKAFEGCYICTG
RLGGALVKSHNYDLTVRPVPDVPPMIEMQGPKRVVLTRGQNLTLTCSTTNVNGDIKLKWA
APPGKDAVWASSPQQPAVENGSRILTEPITHVRSATLHINSVGTQDSGRYRCEGQNEKGI
SSESIWLDVYDRGFINLAPSDNSTVRVRAGESLSLRVDMEAYPKPHTFSWSFSGQQLRNT
SDFVITTQNHQHRYNSELRLVRLKMSESGVYTFYASNDDATINQSFSVYVISKPEIVSHD
GPVNGQVRCVAEGYPAPQITWYYCEQPYMRCSHQMNATQEEQDIVTVTLLSPSFGKTEVE
SRLNITTGRFHTLECVATVEGEQDYTLFSISERTVTHELFTPLLIGIVSATTLLTLILIV
LFYKYLQKPKYQIQWKVIEGIHGNNYVYIDPTQLPYDHQWEFPRDKLRFGKTLGSGAFGK
VVEATAYGMSKADTVMTVAVKMLKPSAHATEKEALMSELKVLSYLGNHMNIVNLLGACTV
GGPTLVITEYCCFGDLLNFLRRKRETFFCAKLGEDCYYRNVMLQRETATAGSDGDSRNGY
MDMRPSVAGVLPNGFFSEKRRSIRKAGGSSSEPDVVSEMLHEDSLSLDTEDLLSFSYQVA
KGMDFLASKNCIHRDLAARNILLTQGRVAKICDFGLARDITTDSNYVVKGNARLPVKWMS
PESIFECVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMDAPEYAPS
EMYEIMKSCWDSNPFKRHSFSKVVERIEQQLSDTTKHIYLNFSSRFPVTMGQQVTSVDQG
TQNANVLLLNSVGSSNASTQPLLASTSVDIFLGETDTGVRVHRV
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggaataccactgggtactgttttctgtcttgatacagttatccttccaaacaggcagc
gccagacccaccatcacccccagaggcctccacctggtcattccactcaacgcccccctc
agcctgctttgccagggtgaccaggtggtgcaatggcagcgggaggaccgtcccaagctg
aggggtgaggagcggactaatggggcgtccatcctgaaaatccccagagctcagcctggc
cacatgggccgatacatctgtctggaggagagaaccggagagcagagctctgtctacgtc
tacgtcaaagatcctgataatgcctttagaaagaccatagtgttcagtatcctgactcgt
gcgggagacagtgcctccatcccctgcctagcaaccgacccgggagtggtcaacctgcgc
ctggagccgtgccatggcagtgccctccctaatggtctccactatgctgccagcctggag
cggggcatagttatctatgacactaagaaggcctttgagggctgttacatctgcactggc
agactgggcggtgccctcgttaaatcacacaactatgatctgactgtgcgaccagtccca
gatgtgcctcctatgattgagatgcaggggcccaagagggtggtcctgacgcggggccag
aatctcaccctgacctgcagcaccaccaacgtcaacggagacatcaagctgaagtgggcc
gctccgcccggcaaggatgccgtgtgggcttcgtctccacagcaaccggcagtggagaat
ggctcacgcatcctgactgagcccatcacacacgtccgcagcgctacactccatatcaac
tctgtcgggacacaggattctgggagatatcgatgtgagggtcagaatgagaaggggatc
agctctgagtcaatctggctggacgtctatgatagaggtttcatcaacctggctccgtca
gataacagtactgtgcgtgtgcgtgctggggagagtctgtccctgcgtgtggacatggag
gcctatcccaaaccacacaccttctcctggagcttctcaggccagcagttgaggaacacc
tccgactttgtcatcaccacacagaaccaccaacacaggtacaacagtgagctcaggctg
gtgcgtttgaaaatgtcagagagtggagtctacaccttttatgcctccaatgatgatgca
acaatcaatcagtcattttcggtctacgttatcagtaaaccagagattgtatctcatgat
ggcccagtaaatggacaggtgcgatgtgtagctgagggataccccgccccacagatcacc
tggtactactgcgaacagccttatatgaggtgctcccaccagatgaacgccactcaggag
gagcaggacattgtcacggtgacgttgttgagtccttcctttgggaagacggaggtggag
agcaggctgaacatcaccacgggaagattccacacgctggagtgtgtggccaccgtggag
ggagagcaggactacacactgttctctatcagtgagagaacagttacccatgagctcttc
acccctctgctgattggaatagtgtcagcaaccaccctcctcaccctcatcctcatagtg
ctcttctacaagtacctgcagaaacccaaataccagatccagtggaaagtcattgaaggt
atccacggaaacaactatgtgtatattgaccctacccagctcccatacgaccaccagtgg
gagttcccccgggacaaactgcgttttgggaaaactctgggctctggagccttcgggaag
gtagtggaggctactgcttatggaatgtccaaagctgatacagtgatgacagtggcggtc
aaaatgctcaaacccagtgcccatgccacagagaaggaggctctgatgtcagagctgaaa
gttctcagttacctgggaaaccacatgaacattgtcaacctgctgggagcctgtactgtt
ggaggcccaaccctggtgatcacagagtattgctgcttcggtgacctcctcaactttctg
aggaggaagagggagacgttcttttgcgccaagctaggggaggactgctactacaggaat
gtaatgttgcagagggagacagctacagctgggtcagatggagacagcaggaatggctac
atggatatgaggccttctgtcgctggtgtcctgcccaatggcttcttctcagagaagaga
cgctcgatacgcaaagcaggtggttccagtagtgagcctgatgttgtgagtgagatgctc
catgaggacagtctctctctggacactgaggatctgctcagcttctcctatcaagtggcc
aaaggcatggacttcctggcttccaaaaattgcatccacagagacctggctgcccggaac
attctgctgacccaggggcgagtggcaaagatctgtgacttcggcctggcccgtgacatc
actacagactccaactatgtagtcaaaggcaatgctcgcctcccagtcaagtggatgtct
ccggagagcatctttgagtgtgtgtacacatttgagagtgacgtgtggtcctatggcatc
ttgctctgggaaatcttctcactcggaagcagtccatatcctgggatgcctgtggactca
aagttctacaaaatgattaaggaaggatatagaatggatgcaccagagtatgcaccgagt
gaaatgtatgagataatgaagtcgtgctgggactcgaacccctttaagagacactccttc
agcaaggtggtggagaggatcgaacaacagctgtcagacaccaccaaacacatttatctg
aacttcagctccaggtttccggttacaatggggcaacaggttaccagcgtggaccagggg
acccagaatgccaacgtccttcttctcaactctgtgggcagcagcaacgcctccactcag
cccctattggccagcaccagcgttgacatctttctgggggagacggacaccggggtcagg
gtccaccgggtgtaa
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