| Entry |
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| Name |
(RefSeq) platelet-derived growth factor receptor alpha-like
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| KO |
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| Organism |
cclu Coregonus clupeaformis (lake whitefish)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cclu00001]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121533963
04020 Calcium signaling pathway
121533963
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121533963
09144 Cellular community - eukaryotes
04510 Focal adhesion
121533963
04540 Gap junction
121533963
09142 Cell motility
04810 Regulation of actin cytoskeleton
121533963
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:cclu01001]
121533963
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:cclu04090]
121533963
Enzymes [BR:cclu01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121533963
Protein kinases [BR:cclu01001]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
121533963
CD molecules [BR:cclu04090]
Proteins
121533963
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
20:57962580..57987089
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| AA seq |
1467 aa
MDEMKTCLIIVFVLFGLLSVTRGLAPPTIVSTEDEFVLEPLSVFNISCTGKRNVAWVEPL
PDDTFVLPGYYTATLFIYNASVTHTGIYTCKYQDKEGDEEEDGVDNDAFIYVFVPDPEIP
FVPEEPDSLLVPVYPNGTIIPCRVSDPHSLVVLKSAPSGVEVDAVYENKIGFIGNLDAGL
YICETTVNGVTMTSDTYTVEANKQMENVHVEVKASEEAVRLGEPFNITCVAPPGLPYQQQ
WLHPRKQAVDAVQMKQTLPDRVVYTLSIPAATSQDSGVYECSITNNFSGEIRANRVAVTV
FEENSFVTLDHSGIGVVEFVSMMEETEFTINIAAFPAPKVTWMKDGIAITENSYFLTKTS
HLEGNQYQSTLTLRQPLEEDSGNYTIMVLSSPHTAQFSFTLKVKASGPVLFQPASAPVLF
PQREEMVVPLHTPFTLTCRGEAELAWDMPVYQSEQTDEDNSGLFVTTVTVENATAAHTGF
YTCFYNGGNSTEEGEDSSIYIYVPDPEVPFVPSLVPFGNHVLNGHDEMEIQCRVSDPSAN
VTLVNTDTQQAVPMMVYDSKRGAVGFFSAGTYVCKALINGEEHLSEEYIVHGWAGGLELH
VELKAQKTALLVGDTITVSCVARGSEILEDHWKYPGKLANRGLKSVRENKRDQEIQYIMT
VPQASAKDSGIYACSITDIISNESQTKELAITVYESPFVSLHPAFSSQESAELDESREFR
ADIDSFPSAQLTWLKDGLPLNYVAAEITTSLQQLNETRYQSVLTLIRAKEEDSGNYTIRV
QNGNHTHSHSFSLQVKVPAVIVDLMDVHHGSDSGQSVVCIAGGMPTPEVEWFICKNIKHC
ANDSSQWVPLPTNDTDVTVEAHFDQDNQLKSQLIFVHLENTLAVRCLARNEMAVVSREVK
LVSQGPHSELPVTAAVLVLLVIVIISLIVLVIIWKQKPRYEIRWRVIESVSPDGHEYIYV
DPMQLPYDSRWEFSRDGLVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARS
SEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPTYIITEYCFYGDLVNYLHKNRENFLS
LHPEKTKKDLDIFGINPADESSRSYVILSFESGKGDYMEMKQADTTQYVPMLEMSDASKY
SDIQRSEYDHPPSQKGDNEMDSLLSEDGNEGLSTTDLLSFTYQVARGMEFLSSKNCVHRD
LAARNVLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNMYTTLSDV
WSYGILLWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMAKPEHAPADVYEMMIKCWNSEPE
KRPSFLSLSESVASLLPSGYKRCFERVSHEFLKSDHPAVTRVQVEGDDAYIGITYKNQDK
SKDRESGFDEQRLSSDSGYIIPLPDLDPLSDDEYGKRNRHSSQTSEESAIETGSSFTLAK
REGETLEDISLLDEMFLGSELVEDSFL |
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| NT seq |
4404 nt +upstreamnt +downstreamnt
atggatgaaatgaagacatgtctcatcattgtgtttgtcttgtttgggttgttgtcagtt
acccgcgggctggccccaccgaccattgtatcaactgaagatgagtttgttctcgagccg
ctctccgtgttcaacatcagctgcaccggtaaaaggaacgttgcttgggtcgagccccta
ccagatgacacatttgttttgcctggatattacacggccacgctcttcatctacaacgct
tctgtgacacacaccggaatttacacctgcaaatatcaagacaaagagggcgatgaagag
gaggatggcgttgacaatgatgctttcatatacgttttcgtcccagatcctgagattcca
tttgtgcctgaggagccagatagcttgctagttccagtctatcccaatggaaccatcatc
ccctgcagggtgtcagaccctcactccctggtcgtcctaaagagtgctcccagtggagta
gaggtggacgcagtttatgagaacaagatcggcttcattggcaacctggatgctggattg
tacatctgtgagaccaccgtgaatggcgtgacaatgaccagtgacacctacactgtggag
gccaacaaacagatggagaacgtccatgtggaggtgaaggccagcgaagaggcagtgaga
ctgggggaacccttcaacatcacctgtgttgcccctccaggactgccctaccagcagcag
tggctccaccccaggaaacaggctgtggatgcagtccagatgaagcagactctgcctgat
agagtggtatacaccctcagtatcccagcagccacctctcaggatagtggggtgtatgag
tgctccatcaccaacaacttcagtggcgagatcagagccaacagggtggctgtcactgtc
ttcgaggagaactcctttgtgacgttggaccacagtgggattggagtggtggagtttgtc
agtatgatggaggagacagagttcaccatcaatattgcagccttccctgcccctaaagtc
acctggatgaaagacggtatcgccatcactgagaacagctacttcctcaccaagaccagc
catctggagggcaaccagtatcagagcactctgactcttcggcagccactagaggaggac
agtggtaactacaccattatggtcctcagcagccctcacactgcccagttctctttcacc
ctcaaagtgaaagcctcaggcccagtactgttccagccagcctcagccccggtgctgttc
ccccagagagaggagatggttgttcccctccacacccccttcacgctgacatgcaggggc
gaggccgagctggcctgggacatgcccgtctaccaatcagagcagaccgatgaggacaac
agcggcctgttcgtcacgacagttaccgtagagaatgccactgcggcccacactggcttc
tacacctgcttctacaacggagggaactccactgaggagggagaggacagcagcatctac
atatatgtgccagatccagaggtgcccttcgtcccctctctggtgccctttggcaaccac
gtcctgaatggtcacgatgagatggagatccagtgtcgcgtgtcggaccccagtgccaat
gtgaccctggtcaacactgatacccagcaggccgtgcccatgatggtctacgacagcaag
aggggagccgtgggcttcttcagcgcaggaacctacgtctgcaaggccctcatcaatgga
gaggagcatctcagtgaggagtacatcgtccatggctgggcaggggggttagagctgcat
gtggagctgaaggctcagaagactgccctcttggtgggagacaccatcactgtctcctgt
gtggcccgggggtctgagatactggaagaccactggaagtaccctggaaaactggcgaac
cgtggcttgaagtcggtgcgtgagaataagagggaccaggagatccagtacatcatgact
gtcccccaggcctcagccaaagacagcggcatctacgcctgctccatcactgacatcatc
agcaatgagagccagaccaaggagctggccatcactgtctatgagagcccatttgtgtcg
ctgcaccctgcatttagttctcaggagtcagcagagctggatgagagcagagagttccgg
gccgacattgactccttccccagcgcccagctcacatggctcaaagatggcctccccctc
aactacgtggcggctgagataaccaccagcctccagcagctcaacgagaccaggtaccag
agtgttctgaccctgatccgggccaaggaggaggacagtgggaactacaccatcagagtg
cagaacgggaaccacacccacagccacagcttcagcctgcaggtcaaagtacccgcagtc
atcgtggacctgatggacgtccaccatggctcagactcaggccagtctgtagtgtgtatc
gctggaggcatgcccactcctgaggtggagtggttcatctgcaagaacataaaacactgt
gccaacgactcgtctcagtgggtgcccctgcctaccaacgacacagatgtcactgtggaa
gcacattttgatcaggacaaccagctgaagagccagctgatcttcgtgcatcttgagaac
actctggccgtccgctgcctggccaggaacgagatggccgtcgtcagcagggaggtcaag
ctggtgtcacaaggcccccactctgagctgcctgtaactgctgctgtcttggtgctgctg
gtcattgtcatcatctcactcattgtcctggtcattatctggaaacagaagcctcgctat
gagatccgctggagggtgatagagtcagtgagccctgatggtcatgagtacatctacgtt
gaccccatgcagctgccatatgactccagatgggagttctctcgcgatgggctcgtactg
ggtcgtgtcctgggctctggggcgtttgggaaggtggtggagggaactgcatacggactc
agccgctcccagcccgtcatgaaggtggctgtgaagatgctgaaacccacggcccgctcc
agtgagaaacaggccctgatgtcagagctgaagatcatgactcacctgggccctcacctc
aacatcgtcaacctgctgggggcctgcaccaagtcaggccccacctacatcatcactgag
tactgcttctatggagacctggtcaattacctgcacaagaacagagagaacttcctcagc
ctgcacccagagaagaccaagaaagacctggacatctttggcatcaaccctgcagatgag
agcagcaggagctatgtgatcctgtcctttgagagtggtaaaggggactacatggagatg
aagcaggcagacaccacgcagtacgtgcccatgctggagatgagtgatgcctccaagtat
tccgacatccagaggtctgaatatgaccacccaccatcacagaagggtgataatgagatg
gacagcctgctgtcagaggacggcaacgagggcctcagcaccacagacctgctcagcttt
acctaccaggtggccagaggcatggagttcctgtcctctaagaactgtgtgcatcgagac
ctagctgccaggaatgtcctgctctctcaggggaagatagtgaagatctgtgactttggc
ctggccagagacatcatgcatgacaacaactatgtctccaaaggcagtaccttcctgcca
gtgaagtggatggctcctgagagtatctttgacaatatgtacaccactctcagtgatgtc
tggtcctacggcatcctcctctgggagatcttctctctaggtggcaccccatacccaggg
atggtagtggactccagcttctacaacaagatcaagagtggctacaggatggccaaacct
gagcacgcccccgctgatgtgtatgagatgatgataaagtgttggaacagtgagcctgag
aagaggccttccttcctcagcctgagtgagagtgtggcttcactgctgccctccggctac
aagaggtgcttcgagagggtaagccatgagttcctgaagagtgaccatccagcagtgacc
agggtccaggtggagggtgatgatgcctacattgggatcacctataagaatcaggacaag
tcgaaagacagggagagtggcttcgacgagcagcgcctcagctctgacagtggttacatt
atccccctccctgacctggaccctctgtctgatgacgagtacggcaagaggaaccgccac
agctctcaaacatctgaggagagtgccatagagacaggctctagcttcacgctggccaag
agagaaggagagaccctggaggacatcagcctgttggatgagatgtttctgggctcagag
ctggtggaagacagcttcctgtga |
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