Coregonus clupeaformis (lake whitefish): 121534000
Help
Entry
121534000 CDS
T08357
Name
(RefSeq) integrin alpha-L-like isoform X1
KO
K05718
integrin alpha L
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecules
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121534000
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121534000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121534000
04515 Cell adhesion molecules [BR:
cclu04515
]
121534000
04090 CD molecules [BR:
cclu04090
]
121534000
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121534000
Cell adhesion molecules [BR:
cclu04515
]
Integrins
Integrin alpha subunits
121534000
CD molecules [BR:
cclu04090
]
Proteins
121534000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
ITGAX-like_Ig_3
Integrin_A_Ig_2
VWA_2
FG-GAP_3
Mid2
Copine
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
121534000
NCBI-ProteinID:
XP_045072971
LinkDB
All DBs
Position
Unknown
AA seq
1218 aa
AA seq
DB search
MLVDKEKDKMSGQGTLSLLTCMAAIAVSSMAFNIDENPPQIYKGEEQDLFGYKVLQFISG
KEKGVMVSAPHQKNGSGGICRCAQDRTNCTNCYTPEETDTIKYIGLSMAGQSTSPPTFTA
CSPGLAHECDGNSYLNSICYQFNSQLQITSNFTPAFQECTKKIVDLVFLFDGSGSMTKKE
FEENKGFINNITTTLKNSSIKFAAVQFSLTARTVFNFNDYQEGRALTNLMKEEHMDLLTN
THQAIDFVLKNIFENQAAGATADATKVLVVITDGNPSDTDKKFNSIKRSDEKNIIRFVIG
VKNVNLTKLKSLASEPKENNTFLIQDYNGLKGILDNFQKKIFNIEGSKTALAGNLTKEMS
QSGFSAVYGNKDTLVLGSVGSNNWRGSLFETEGLRSEEKEIQDPTLDKDSYMGYSVAVGK
KKENLLYFTGAPRSEHMGRILLFNKVNNNWTVAQRLSGEQMGSYFGAELCSVDIDSDSNT
DFLLVGAPMFHQPPREGRIYVYTLTDKLELRMEMNVSVPSPGRFGSSISSLTDLNGDGLK
DVAVGAPLEDDRRGAVYIYLGEKLRGIRPEFSQHISAAVIRSKLQFFGQTIDGKMDLGED
GLTDIVVGARGAVVVLRSRPVLSVSTHLHFHPLEINTDNFDCLARETISPVVTLTACFNM
AEATKSKAGALSAGMNVSYSLVVDPVRQRSRAFYSDTNKGARRLRSTVELRKERTCFNHS
VYMTQCVIDTLSPIIIQLNFSQSESQQEGPTAILNTDSPTQAVVEVPFEKNCKENETCVA
ELEVDFNFITSTLLVVDQSYFNVTIRLSNHGDDSFNTSLTLLYPPGLSFSMMHLLKSTRR
TLFSCGGLEGEMDRTTCSVSLPVYRSKTTAVFTSKFHILNTYDWNDTMEMTVIGLSDNGN
STNSSLTRTIPVQFAVDLAAKALPQDSTTYINFTLEDTSPKKLVNVYEVQNLDSKSVPIT
VTFTFPTKLEHKFEMKDYQISVSQNHTQCGKVMNSTTEYCSPEKYCKSIECESFLLEKFS
IITFVLSGNVSFKDLDQHARSMSLPKKFTGDRETVNFISFVKLSFDKKRYVQTASDQGDN
STSFHQTQIDVQAEIIIPPHRQLIIGTGVGVGIFLLIIVTVAMYMMGCFKRKRFVDNAQE
GENEGEQSEQDDAAQPNNICVNISEKQPQPEREPESGAVESKPLLDDIQTENNGFPTSSE
AVGEGPKEKQDVSESEAG
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgctggtggacaaagagaaggataagatgtctgggcagggaaccctctccctgctcacc
tgcatggcagccattgctgtctcttcaatggctttcaacattgatgaaaaccccccacaa
atctacaaaggggaggaacaagatttatttggttacaaagtcctgcaattcatttctggc
aaggagaaaggggtaatggtcagtgcgccacatcagaagaatggatctggtggaatctgt
agatgtgctcaagaccgaacaaactgtacaaactgttacactcctgaagaaactgacaca
atcaagtacattggactgtctatggctggacaatctacttctcctccaacgttcactgcc
tgcagccctggcctggcacacgagtgcgatgggaactcctatctgaacagtatctgctat
cagttcaacagccagctccagatcacctctaacttcacgcctgccttccaagaatgtacg
aagaaaatagtggacctcgttttcctctttgacggatcaggaagcatgacaaagaaagaa
tttgaagagaacaaaggtttcataaacaatatcacgacaaccctaaaaaattcctcaatc
aagtttgcagcagttcagttctcattaacagccaggacagttttcaacttcaatgactac
caagaggggagagccttgactaatcttatgaaagaagagcacatggatcttctaaccaat
acacatcaggcgatagactttgtcttgaaaaacatttttgaaaaccaagctgccggcgcc
accgcagatgcaactaaagtactggtcgtaataacagatggaaatcccagtgatactgat
aaaaagtttaactctatcaaaagaagtgatgagaaaaacataatccgcttcgtcatcggg
gtcaagaatgtcaatttgacgaaactgaagtccctggcatcagagccaaaagagaacaac
actttcctcatccaggactacaacggactaaaaggaatcctagacaactttcaaaaaaag
atcttcaatattgaaggttccaagactgctctggctggaaacttgactaaagagatgtct
cagagtgggttcagtgctgtctacggtaataaggacaccttggttttgggctcagtggga
tcaaacaactggcgtggatccctctttgagactgagggtctgagatcagaggaaaaggaa
attcaggaccccaccttggacaaagactcatatatgggatactctgtagctgttgggaag
aagaaagagaaccttctatattttaccggagcaccaagatctgaacacatgggacgaatc
ctacttttcaacaaggttaacaacaactggactgtggcacaaagattgtctggagaacag
atgggctcctactttggggcagagctgtgttctgtggacatagactcagacagcaacaca
gacttcctcctggtgggtgcaccaatgtttcaccaacctccgagagagggcaggatctac
gtttacacactgactgataagttggaactgaggatggagatgaatgtgtcagtgccgtct
ccgggtagatttggctcctccatctcctctctcacagacctgaatggagatggcctgaag
gatgtagctgtgggcgctccacttgaggacgatcgcaggggggccgtgtacatctacctg
ggtgaaaagctaagggggatccgccctgaattcagccagcacatctcagctgcggtgata
agatctaagctccagttctttggccagacgattgatgggaagatggacctgggtgaggat
ggactgactgacatcgtagtaggagcgcgtggcgcagttgtcgtcttgaggtccagaccg
gtcctcagcgtgtccactcatctccatttccatcccttggagatcaacactgataacttt
gactgtcttgcaagagagaccatttcccctgtggtcactttaacagcctgctttaacatg
gcagaggcaacaaagagtaaagctggagcgctgagtgcagggatgaacgtctcctactcg
ctggttgtggatccagtgagacagaggagccgagccttttacagtgacacgaacaaaggg
gccagaagacttcgctctactgtggagctgagaaaggagcggacctgcttcaaccactca
gtctacatgacacaatgcgtgatcgacacattatcgcccattatcatccaacttaatttt
tctcaatctgaaagccaacaagagggtcctactgccattctgaatactgatagtcctaca
caggctgtggtcgaggtaccctttgaaaagaactgcaaagaaaacgaaacctgtgtggca
gagcttgaggtggacttcaactttatcacctcaactttattagtggtggaccagagttac
tttaatgtgactataagactgtccaatcatggggatgactccttcaacactagtctaacc
ctcctctaccctcctggcctctcattctccatgatgcatcttctgaagtccacaaggaga
actttgttcagctgtggtggtctggaaggtgaaatggacagaactacatgcagtgtcagc
ctccctgtctaccgtagtaaaactacagcagtgttcaccagtaaattccatattttgaat
acatacgactggaatgacacaatggaaatgaccgtcataggcctgagcgacaatggaaac
tcaaccaatagttccctaaccaggaccatccctgttcaatttgcagttgacctggctgca
aaagcccttccccaagactccactacttacattaactttactctggaggatacatcaccc
aaaaaactggtgaatgtgtatgaggtgcagaacttggactctaagtctgtacccatcaca
gtcaccttcacattcccaactaagcttgagcacaaatttgaaatgaaggactaccaaata
tctgtctcacagaaccatactcaatgtggaaaggttatgaattcaacaacagagtactgc
tctccagaaaaatactgcaagtccatcgagtgtgaaagtttccttttggagaagttttcg
ataattacatttgtgctgtctggaaatgtttccttcaaggacctcgatcaacatgcaagg
agcatgtcattgccaaagaaattcactggagatagagaaacagtcaatttcatcagtttt
gtcaaactcagctttgacaaaaaacgatatgtccagacagcgagtgaccaaggggataac
tctacgagcttccaccaaacacagattgatgttcaggctgagatcatcattcctccacat
agacagctgataatagggacaggagttggagtaggaatcttcctcctgatcatcgtcaca
gtggccatgtacatgatgggatgtttcaagagaaaaaggtttgttgataacgcacaggaa
ggtgagaatgaaggggaacagagtgagcaagatgacgctgctcagcctaacaacatctgt
gttaacatatcagagaagcagccacagcctgagagagagcctgagagtggagcagtggag
tcaaaacctctccttgacgacattcagacagaaaacaatggcttcccaactagcagtgag
gcggtaggggagggaccaaaagagaaacaggatgtgtcagagtcagaagcaggctaa
DBGET
integrated database retrieval system