Coregonus clupeaformis (lake whitefish): 121534014
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Entry
121534014 CDS
T08357
Name
(RefSeq) alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B-like isoform X1
KO
K09661
mannosyl alpha-1,6-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B [EC:2.4.1.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00510
N-Glycan biosynthesis
cclu00515
Mannose type O-glycan biosynthesis
cclu01100
Metabolic pathways
Module
cclu_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
121534014
00515 Mannose type O-glycan biosynthesis
121534014
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121534014
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
Wide specificity
121534014
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_18
Motif
Other DBs
NCBI-GeneID:
121534014
NCBI-ProteinID:
XP_041696354
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Position
20:60192679..60347334
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AA seq
808 aa
AA seq
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MITGNIDGKIMVRRCLVTFKPFRIFVVGIGFFSLCFLMTSLGGQFSAKRLGDSPFTIRTE
VIGGVESRGVLRKISDMLEVILKRMDSLSKLDNSTTSDTRRLDELSSAINRFQPAGLVEM
IQAIAQNMSNMAVRVEQILQNSMAAGRAVRDGSSGQCEVPRDPHYPDCPGKVDWMRARWT
SDPCYAFYGVDGSDCSFLIYLSEVEWFCPPLAWRNHSSPPTVHTHTHHTTTPRRQAAFRT
DLSSLLDQVGTGKESLSFMKRRMRRLASQWGTAAQRLHAKLRQRWREQKKILVHVGFLTE
ESGDVFSPKVLKGGPLGEMVQWADILTALHVLGHNLKISMSLKELQGFLGVPPGRGSCPL
TGPLPFDLIYTDYHGMQQMKQHMGLSLKRHKCHIRVIDTFGTEPAYNHEDYATLHGYRTN
WGYWNLNSRQYMTMFPHTPDNSFMGFVSEELNNTEKRSIMQNKVNNMAVVYGKEASMWKL
QQGKEGFLQILHRYMEVHGTVYYETQRPPEVPAYVKNHGLLPQHELQMLLRKAKLFIGFG
FPYEGPAPLEAIANGCIYLQPKFHPPHSSLNHEFFRGKPTSREVSSQHPYADQYIGRPHV
MTVDYNNSQEFDTAIREIMNTKVEPYLPYEYTCEGMLERVHAYIQHQDFCTPEAPFPPAN
SSYSKLGSSSPASPGPQFVLLPNSSALTWAPNTSAPPSWPPLSSLRLLASQEGQSCVEAC
QRANLVCEPALFRFVNNKEALRGLEVQCEVVEAEVNHVFPAFSVLRRECGLQKDPLLYSC
AGHSPKYRRLCPCRDYRRGQIALCRDCL
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgattactggaaacatcgacggtaaaataatggttagaagatgccttgtgacgttcaaa
ccgttcaggatattcgtggtggggatcggattcttcagcctgtgttttctaatgacctcc
ctggggggccagttctcagccaagaggcttggggactcccccttcaccatccggacagaa
gtgataggtggagtggagtctcgtggggtgcttaggaagatcagtgacatgctggaggtg
atcctgaagaggatggacagcctctccaaactggacaacagcaccaccagcgacacccgc
cgcctggatgaactcagctcggccatcaacaggttccagccagcaggcctggtagagatg
atccaggctatagctcagaacatgtccaacatggcggtcagagtggaacagatcctccag
aacagcatggccgccggcagagcagtgagagatggctcgtcaggccagtgtgaggtaccc
agagacccccactacccagactgccctggaaaagtggattggatgcgtgcccgctggacg
tcagacccgtgctatgccttctacggggtggacggctccgactgctccttcctcatctat
ctgagcgaggtggagtggttctgcccccctctggcctggaggaaccacagcagccccccc
accgtccatacacacacacaccacaccaccacccccaggagacaggctgcgttccgtaca
gacctgtcatctctgctggaccaggttggcacgggcaaagagtccctgagcttcatgaag
cgccgcatgaggaggctggcatcacagtggggcacggccgcccagcgcctccacgccaag
ctgcgccaacgctggagggaacagaagaagatcctggtgcacgtgggcttcctgacagag
gagtcaggggatgtgttcagccccaaggtcctgaagggtggtcccctgggggagatggtc
cagtgggcagacatcctcacagccctccatgtcctgggacacaacctcaagatctccatg
tctcttaaagaactgcaggggtttctcggggtgcccccaggcagagggagctgccccctg
acaggacctctgccctttgacctcatctacacagactaccacggcatgcagcagatgaag
cagcacatggggctctcgctcaagagacacaagtgccacatccgtgtgattgacaccttc
gggacagagccggcctacaaccacgaggactacgccaccctgcacggctacaggaccaac
tggggctactggaacctcaactccagacagtacatgactatgttcccccacactccagac
aactcgttcatgggctttgtgtctgaggagctgaacaacacagagaagaggagcatcatg
cagaacaaggtcaacaacatggccgtggtttacggcaaggaggccagcatgtggaagctc
cagcagggtaaggagggtttcctccagatcctccacaggtacatggaggtccacgggaca
gtgtactacgagacccagcggccccccgaggtgcctgcctacgtcaagaaccacggcctg
ctgccccaacacgagctgcagatgctgctccgcaaggccaagctcttcatcgggtttggt
ttcccctacgaagggcccgcccctctggaggccatagccaatgggtgcatctacctgcag
cccaagttccacccaccccacagctcgctcaatcacgagttcttcagaggcaagcccacg
tctagagaggtgtcgtcccagcacccatatgcagatcagtacatcgggcggccccatgtc
atgacagtagactacaacaactcccaggagtttgacaccgccatcagagagatcatgaat
accaaagtcgagccatacctaccgtatgagtacacttgcgagggaatgctggagagggta
cacgcctacatacagcatcaggacttctgcacccccgaggcccccttccctccggccaac
tcctcctactccaagctggggtctagtagtccggctagccctgggcctcaatttgtcctg
ctgcccaactccagtgccctaacctgggcccccaacaccagcgcccccccttcctggccc
cctctcagctccctgaggctgctggcatcccaggagggccagtcatgtgtggaggcgtgc
cagcgtgccaacctggtgtgtgagcccgcgctgttccgcttcgtcaataacaaggaggcc
ctccgtgggttagaggtgcagtgtgaggtggtggaggcggaggtcaaccacgtgttccca
gccttctccgtcctacgccgggagtgcggcctccagaaggaccccctcctctacagctgc
gccggccacagccccaagtaccgccgcctctgcccctgccgggactaccgccgcggccag
atcgctctctgccgagactgcttatga
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