Coregonus clupeaformis (lake whitefish): 121534035
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Entry
121534035 CDS
T08357
Symbol
jupa
Name
(RefSeq) LOW QUALITY PROTEIN: junction plakoglobin a
KO
K10056
junction plakoglobin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04382
Cornified envelope formation
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121534035 (jupa)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121534035 (jupa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121534035 (jupa)
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121534035 (jupa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Cnd1
HEAT
HEAT_2
ELMO_ARM
ARMC9_ARM
Adaptin_N
Atx10homo_assoc
BORCS7
ParB_C
Motif
Other DBs
NCBI-GeneID:
121534035
NCBI-ProteinID:
XP_045061486
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Position
20:complement(51426724..51437024)
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AA seq
732 aa
AA seq
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MEMQMGNDGMVKVKEWQQTYYAGDSGIQSGATTVRTDNDGTEYSTKHYSTVTTTVVSENP
AEVESQYALTRAQRVRAAMFPETVMEGTAILSTQTDPSQMTNVQRLAEPSQLLKTAIVHL
INYQDDAELATRAIPELTKLLNDEDQVVVNKASLIVNQLTRKEASRRALMSSPQMVAAVV
RAMQNTGDMETARATASILHNLSHQREGLLSIFKCGGIPALVRMLSSPMESVLFYAITTL
HNLLLHQEGAKMAVRLADGLQRMVPLLKKSNPKFLAITTDCLQLLSYGNQESKLIILANS
GPEGLVHIMRNYSYEKLLWTTSRVLKVLSVCPSNKPAIVDAGGMQALGMHLTGSSQRLMQ
NCLWTLRNLSDAATKQEGLDSLLQTLVGLLSSDDVNMLTCSTGILSNLTCNNARNKAMVT
QGNGIEALIHAILRAGEKEDVAEPAVCALRHLTSRHSDAEVAQNAVRMHYGIPAIVKLLN
QPYYWPVIKAVVGLIRNLALCPDNQTPLRDAGAIPRLVNLLLKAHQDAQKHGSAAQQTYQ
DGVRMEEIVEGCTGALHIMARDPINRGEIANMQTIPLFVQLLYSPVENVKRVSAGALCEL
ALDKHSAEMIDAEGASAPLMELLHSNNEGIATYAAAVLFRISEDKNSDYKKRVSVELTHS
LFKHDPAAWEMAHNAVPMEAGYPADELDAGYNHYGDYPADMPMDGEMGMSDVEYQSGGVT
YDMRQPGYADHY
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgcagatgggcaatgacgggatggtgaaggtgaaagagtggcagcagacatac
tatgccggggactctgggatccagtcaggagccaccacagtgaggacagataacgatggg
accgaatacagcaccaagcactacagcaccgtcaccaccaccgtcgtctcagagaaccct
gctgaagtggagtctcagtatgccctgacccgggcccagcgtgtccgagcggccatgttc
ccagaaacggtgatggagggcacggccatcctgtccacccagactgacccgtcccagatg
accaacgtccagcgcctggccgagccctcgcagctcctcaagacggccatcgtccacctc
atcaactaccaggatgacgccgagctggccacgcgtgccatccccgagctcaccaagctg
ctcaacgatgaggaccaggtggtggtcaacaaagcctccctgatcgtcaaccagctgacc
cgtaaggaggcgtctcgccgggcgctgatgtcgtctccccagatggtggcggcggtggtg
cgggccatgcagaacactggggacatggagacagcccgggctacagccagcatcctccac
aacctgtcccaccagagagagggtctgctctccatcttcaagtgcgggggcatccctgcc
ctggtccgcatgctcagttctcccatggagtctgtgctgttctatgccatcaccaccctc
cacaacctgctgctgcaccaggagggagccaagatggcggtgcgcctggccgacggcctg
cagagaatggtgcctctgctgaagaagagcaacccaaagttcctggccatcaccacagac
tgcctgcagctgctgtcctatggcaaccaggagagcaagctaatcatcctggctaacagc
ggtccggagggcctggtccacatcatgaggaactacagctatgagaagctcctgtggacc
accagccgcgtgctcaaagtgctctctgtctgccccagcaacaaacctgccatcgtggat
gctggtgggatgcaggctctggggatgcacctgacaggctccagtcagcgtctgatgcag
aactgtctgtggaccctgaggaacctgtctgatgccgccactaaacaggagggtctggac
agtcttcttcagaccctcgttggtctcctgagctctgacgacgtcaacatgctcacctgc
tccactggcatcctctccaacctcacctgcaacaacgctcgcaacaaggccatggtcacc
cagggcaacggcatcgaggcgctcatccacgccatcctgagggcgggagagaaggaggac
gtggcggagccggccgtgtgcgccctgcgtcacctgacatcgcgccattccgatgctgag
gtggcccagaatgctgtgcgcatgcattatggtattcccgctatcgtcaagctgctcaac
cagccctactactggccggtcattaaggctgtggttggtctgatccgtaacctggcactg
tgcccagacaaccagacccctctgagggatgcgggggccatcccccgcctggtcaatctg
ctgctcaaagcccaccaggacgcccagaaacacggctccgccgcacagcagacataccag
gatggcgtgaggatggaggaaattgtggaggggtgcacaggggccctgcacatcatggca
agagaccccatcaacaggggagagatcgccaacatgcagaccatcccactctttgtacag
ctgctgtactctccagtggagaacgtgaagcgcgtgtcagcgggggctctgtgtgagctg
gccctggacaaacactctgcggagatgatcgacgcagagggcgcctcggcaccactcatg
gagctgctgcactctaacaacgagggcatcgccacctatgcagccgctgtcctcttccgc
atctccgaggacaagaactccgactacaagaagcgtgtgtccgtggagctcacgcactcc
ctgttcaagcacgaccccgccgcttgggaaatggcccacaacgctgtccccatggaggca
ggctacccagcagacgagctggacgcaggctacaaccattatggagactaccctgctgac
atgcccatggatggggagatgggcatgtccgatgttgaataccagagcggtggcgtgacc
tacgacatgaggcaaccgggatatgctgaccactattag
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