Coregonus clupeaformis (lake whitefish): 121534045
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Entry
121534045 CDS
T08357
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121534045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121534045
04147 Exosome [BR:
cclu04147
]
121534045
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
121534045
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
121534045
Exosomal proteins of other body fluids (saliva and urine)
121534045
Exosomal proteins of colorectal cancer cells
121534045
Exosomal proteins of melanoma cells
121534045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
AIF-1
DUF2461
YabA
CCDC39
RelA_AH_RIS
Motif
Other DBs
NCBI-GeneID:
121534045
NCBI-ProteinID:
XP_041696410
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All DBs
Position
38:complement(6497902..6501672)
Genome browser
AA seq
468 aa
AA seq
DB search
MSFSRSSMSYSSSGGGGRGGTMSMRSGGGGGMGMGMGSSRFSSMGGGGGGGGRVTAMRAG
SVYGGAGGSGVRISSSSFGSGGGGGGGGYGFGMGGGGGGGGGGADFNVSANEKATMQNLN
DRLSTYLEKVRLLEAANSELELKIRQFMESKTSPSARDYSGFHTTIADLQDKIQAATRLN
GGIYLNIDNAKLAADDFRTKYENELAMRQSVEADIAGLKRLLDELTLARSDLEMQIEGLK
EELIYLKKNHEEELLAMRTQMTGQINVEVDAAPQEDLSRVMAEIREQYESVSAKNQRDLE
SWFQTKTETLNKEVASSTEVLQTSKSEISEIRRTLQGLEIELQSQLSMKGSLENTLAETE
GRYSMQLGRLQSQVTSLEEQLMSLRSDMERQGQEYKMLLDIKTRLEMEIAEYRRLLDGEA
SGLGLSSGLSSSKSGPSSSTSTTRKVVIVTEEMINGKVVSSSETKHTS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctccagatctagcatgtcctacagcagcagtggtggtggaggcagaggtggc
accatgtccatgaggtctggaggtggtggtggaatgggtatgggcatgggctcctcccgc
ttctcctcgatgggtggtggtggcggtggaggaggccgcgtcactgccatgagggccggc
agtgtgtatggaggtgcaggaggatctggggtgcgcatctctagctcctcgttcggctcc
ggtggcggcggtggtggtggcggatatggtttcggaatgggagggggtggcggcggcggc
ggcggtggagccgactttaatgtgtcggccaacgagaaggccacaatgcagaacctgaac
gaccgcctgtccacctacttggagaaggtgcgcttgctggaggcggccaacagcgagctg
gagctgaagatccgtcagttcatggagagcaagacctcccccagcgctcgcgactactct
ggcttccacactactatcgctgacctgcaggacaagatccaggctgccacccgcttgaac
ggaggcatctatctgaacatcgacaatgcaaagcttgctgcagacgacttcagaaccaag
tatgagaatgagctggccatgcgtcagtcggtggaggcagacatcgccgggctgaagagg
ctgctggacgagctgaccctggccagatctgacctggagatgcagatcgaggggctgaag
gaggagctcatctatctcaaaaagaaccatgaggaggagctgctggccatgaggacacag
atgactggacagatcaacgtggaggtggacgcagcaccacaggaggacctgagcagagtc
atggctgagatccgtgagcagtacgagtccgttagtgccaagaaccagcgcgacctggag
tcctggttccagaccaagacagagacgttgaacaaggaggtggcgtccagcacagaggtt
ctccagacctccaagtcagagatctcagagatccgtcgcacactgcagggcctggagatc
gaactgcagtcacagctcagcatgaaaggctccctggagaacacgctggcggagacggag
ggccgttactccatgcagctgggacgcctccagagccaagtgaccagtctggaggagcag
ctaatgtctctccgcagcgacatggaacgccagggccaggagtacaagatgctgctggac
atcaagacacgcctggagatggagatcgctgagtacaggaggctgctggacggagaggct
agcggcctcggcctcagctccggcctcagctcctccaaatccggccccagctcctccacc
tccaccacacgcaaggtggtgatcgtcacagaggaaatgattaacggcaaggttgtctcc
tcaagtgaaaccaaacacacctcttaa
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