Coregonus clupeaformis (lake whitefish): 121534047
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Entry
121534047 CDS
T08357
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121534047
04147 Exosome [BR:
cclu04147
]
121534047
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
121534047
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
121534047
Exosomal proteins of other body fluids (saliva and urine)
121534047
Exosomal proteins of colorectal cancer cells
121534047
Exosomal proteins of melanoma cells
121534047
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
ADIP
Rod_N
YabA
RelA_AH_RIS
DUF2461
AIF-1
Mitofilin
CENP-F_leu_zip
Gp-FAR-1
DUF6236
Motif
Other DBs
NCBI-GeneID:
121534047
NCBI-ProteinID:
XP_041696411
LinkDB
All DBs
Position
38:complement(6465583..6469391)
Genome browser
AA seq
502 aa
AA seq
DB search
MSFSRSSMSYSSSGGGGGGGTMSMRSGGGGGMGMGMGSSRFSSMGGGGGGGGRVTAMRAG
SVYGGAGGSGVRISSSSFGSGGGGGGGGYGFGMGGGGGGGGSYGFGMGGGGGGGGGADFN
VSANEKATMQNLNDRLSTYLEKVRSLEAANSELELKIRQFLESKTSPSARDYSGFHTTIA
DLQDKIQAATCLNGSIYLSIDNSKLAADDFRTKYENELAMRQSVEADIAGLKRLMDEMTL
ARSDLEMQIEGLKEELIYLKKNHEEELLAMRTQMTGQINVEVDAAPQEDLSRVMAEIREQ
YESVSAKNQRDLESWFQTKTETLNKEVASSTEVLQTSKSEISEIRRTLQGLEIELQSQLS
MKGSLENTLAETEGRYSMQLGRLQSQVTSLEEQLMSLRSDMERQGQEYKMLLDIKTRLEM
EIAEYRRLLDGEASGLGLSSSKSGHSSSSSHISSSSSGLSSGLSSSKSGPSSSTSTSHKV
VIVTEEMVDGKVVSSSETKHTS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctccagatctagcatgtcctacagcagcagtggtggtggaggcggaggtggc
accatgtccatgaggtctggaggtggtggtggaatgggtatgggcatgggctcctcccgc
ttctcctcgatgggtggtggtggcggtggaggaggccgcgtcactgccatgagggccggc
agtgtgtatggaggtgcaggaggatctggggtgcgcatctctagctcctcgttcggctcc
ggtggcggcggtggtggcggcggatatggtttcggaatgggagggggtggcggaggcggt
ggcagttatggtttcggcatgggagggggtggtggtggcggtggtggagccgactttaat
gtgtcggccaacgagaaggccacaatgcagaacctgaacgaccgcctgtccacctacttg
gagaaggtgcgctcgctggaggcggccaacagcgagctggagctgaagatccgtcagttc
ctggagagcaagacctcccccagcgctcgcgactactctggcttccacactactatcgct
gacctgcaggacaagatccaggctgccacctgcttgaatggaagcatctatctcagcatt
gacaactcaaagctcgctgcagatgacttcagaaccaagtatgagaatgagctggccatg
cgtcagtcggtggaggcagacatcgccgggctgaaaaggctgatggacgagatgaccctg
gccagatctgacctggagatgcagatcgaggggctgaaggaggagctcatctatctcaaa
aagaaccatgaggaggagctgctggccatgaggacacagatgactggacagatcaacgtg
gaggtggacgcagcaccacaggaggacctgagcagagtcatggctgagatccgtgagcag
tacgagtccgttagtgccaagaaccagcgcgacctggagtcctggttccagaccaagaca
gagacgttgaacaaggaggtggcgtccagcacagaggttctccagacctccaagtcagag
atctcagagattcgtcgcacactgcagggcctggagatcgaactgcagtcacagctcagc
atgaaaggctccctggagaacacgctggcggagacggagggccgttactccatgcagctg
ggacgcctccagagccaagtgaccagtctggaggagcagctaatgtctctccgcagcgac
atggaacgccagggccaggagtacaagatgctgctggacatcaagacacgcctggagatg
gagatcgctgagtacaggaggctgctggacggagaggctagcggcctcggcctcagctcc
tcgaaatccggccacagctcctcaagctcccacatcagttcctctagctccggcctcagc
tccggcctcagctcctccaaatccggccccagctcctccacgtccacctcacacaaggtg
gtgatcgtcacagaggaaatggtggacggcaaggttgtctcctcaagtgaaaccaaacac
acctcttaa
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