Coregonus clupeaformis (lake whitefish): 121534048
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Entry
121534048 CDS
T08357
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121534048
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121534048
04147 Exosome [BR:
cclu04147
]
121534048
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
121534048
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
121534048
Exosomal proteins of other body fluids (saliva and urine)
121534048
Exosomal proteins of colorectal cancer cells
121534048
Exosomal proteins of melanoma cells
121534048
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
GapR_DNA-bd
BRE1
DUF6805
Plectin_PPL
ANC1_spectrin
Motif
Other DBs
NCBI-GeneID:
121534048
NCBI-ProteinID:
XP_041696412
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All DBs
Position
38:6458760..6465082
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AA seq
399 aa
AA seq
DB search
MSFTSRSYTSARALSMYGGAGGRGSRGSRISTSQAGGLYDTASSRGGLDLADGLDLHVSA
NEKATMQNLNDRLASYLEKVRLLEKENAELEKKIKDWYASRPVICHDHSAYFATIAGLKD
KISLASRSNAKTVLDIDNAKLAVEDFKMKYENEQAMRMAVEADISGLRRVLDDMSLGRSD
LEMHYEGLKDELIMLKRNHQEEIALVKTQVGSQVNVSVDAAPSQDLNAAMTEIRKHYESV
AAKNCKELEAWYQGKLATVEIEVVTNNEQLVSCLTELKESKSTLQRLQIELQSHLSMKSS
LEGTLADTQKRYSAQLAGLQSMVTSLELQLSQLHANIAHNKQEYDMLLDLKTRLELEIAE
YRRLLDGEEESSSQVVTKTITVTQTIVDGKVMETTESVK
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcacctccagatcctacacctctgccagggccctcagcatgtatgggggtgcc
ggtggccgcggttcccgcggttcccgcatctccacctcccaggctgggggactctacgac
accgcttcctccaggggtggcttagacctggctgacggcctggacctccacgtgtcagcc
aacgagaaggccaccatgcagaacctgaacgaccgcttggcctcctacctggagaaggtg
aggcttctggagaaggagaacgccgagctggagaagaaaatcaaggactggtatgcatca
cgcccggttatctgccacgaccacagcgcctacttcgccaccattgctggcctgaaagac
aagatcagtttggcatccaggtccaatgccaagactgtgctggacatcgacaatgccaag
cttgctgttgaggacttcaagatgaagtatgagaatgagcaggccatgaggatggcagtg
gaggcagacatcagtggtctgaggagggtcctggatgacatgagcctgggtcgctctgac
ctggagatgcattacgagggtctgaaggacgagctcatcatgctcaagaggaaccaccag
gaggagattgccctggtgaagacccaggtgggcagccaggtgaatgtatcggtggatgct
gccccatcccaggacctgaacgcagccatgaccgagatcaggaagcactacgagtctgtg
gctgccaagaactgcaaagaactggaagcctggtaccagggcaagctggccacagtggag
attgaagtcgtgacaaacaatgagcagctggtgagctgcctcacagagttgaaggagtcc
aagagcaccctccagaggcttcagattgaactgcagtcccatctgagcatgaaatcctcc
ctggagggcaccctggcagacacccagaagcgctactctgctcagctggcagggctccag
agcatggtgactagcctggagctccagctctcccagctccacgccaacatcgcccacaac
aagcaggagtatgacatgctgctggacctcaagacccggctggagctggagatcgctgag
tacaggaggctgctggatggagaggaagagagttcctcccaagtggttaccaagacgatc
accgtgacccagaccattgtggatggaaaggtgatggaaaccactgagtctgttaaataa
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