Coregonus clupeaformis (lake whitefish): 121534050
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Entry
121534050 CDS
T08357
Name
(RefSeq) keratin, type I cytoskeletal 13-like isoform X1
KO
K07604
type I keratin, acidic
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121534050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121534050
04147 Exosome [BR:
cclu04147
]
121534050
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
121534050
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
121534050
Exosomal proteins of other body fluids (saliva and urine)
121534050
Exosomal proteins of colorectal cancer cells
121534050
Exosomal proteins of melanoma cells
121534050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
CC2-LZ
Plectin_PPL
FPP
Fez1
Nuf2_DHR10-like
DASH_Duo1
DUF5497
DUF4763
Motif
Other DBs
NCBI-GeneID:
121534050
NCBI-ProteinID:
XP_041696415
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All DBs
Position
38:6417509..6422825
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AA seq
438 aa
AA seq
DB search
MSALSLRSYGGSRGSSSMSLGGGYQSRIASRAPSVYGGAGGQCVRVSYASGTRSGFDLSS
AFGGDNGSYGCNAVSVSEKATMQNLNDRLATYLEKVRSLETANAQLERQIREWYEKKKPV
ISDYSKYDATLADLRRKISAATLSNASIILQIDNAKLAAEDFKVKFENELVMRQSVEADI
AGLRKVLDEMTMSRADLEMQIEGLKEELVYLKKNHAEEIAALRAHLSASSVNVEVDAAPQ
QDMARMMEEIRTQYEGIAEKNRRDMESWYKDKFDELNKVVASSTETLQTSRNEINELKRT
MQALQIELQSQLSLKAAMEGQLNETESRYSMQLNQLQGMVNSLEEELGRMKTDIERQAGE
YRMLLDIKTRLEMEIAEYRRLLDGEDIGRTVITKKVETVQVQKPVPVVTKRVRTVIEEMV
DGKVVSRTEDVDMEVPQK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctttatcacttcgcagttatggaggcagccgaggctcatcctccatgtctctc
ggaggagggtaccagagtcgcatcgcatcacgggcaccaagcgtctatggaggggcaggg
ggacagtgtgtccgcgtatcttatgcttcgggcaccaggagcggttttgacctgtccagt
gcgtttggaggtgacaatggcagctatggttgtaatgcagtgtcggtcagcgagaaggct
accatgcagaacctcaacgaccgtttggccacctacctggagaaggtgcgctccttggag
acggcgaatgcccagctcgagcgacaaatccgcgagtggtacgagaagaagaaaccggtc
atcagtgattacagcaaatacgatgctactcttgccgacctgcgcagaaagatcagtgct
gccactctgagcaacgccagtatcatcctgcagatagacaatgccaaactggcagcagaa
gacttcaaagtcaagtttgagaatgaactggttatgcgtcagtcggtggaggcagacatc
gctggactgaggaaggttctggacgagatgaccatgtcccgggcagacctggaaatgcag
attgaggggctgaaggaggagctggtctacctcaagaagaaccatgcagaggagatcgct
gccttgcgggcccacttgagcgccagctcagtgaacgtggaggtggacgcagcgccccag
caggacatggccaggatgatggaggagatccgcactcagtacgagggcatcgccgagaag
aaccgccgcgacatggagtcctggtacaaggacaagtttgatgagctgaacaaggtggtg
gccagcagcacagagaccctccagacgtcccgcaatgagataaacgagctcaagaggacc
atgcaggcactgcagatcgagctgcagtcccagctcagcctgaaagcagccatggagggc
cagctgaatgagacagagtcccgttacagcatgcagctgaaccagctccagggcatggtc
aacagcctggaggaggagctgggtcgcatgaagacggacatcgagaggcaggccggcgag
taccgcatgctcctggacatcaagacccggctggagatggagatcgctgagtacaggagg
ctgctggatggagaggatatcgggagaactgtcatcaccaagaaggttgagactgttcag
gtccaaaaaccagtgccagtggtgacaaagagagtgcggacggtgatcgaggagatggtc
gatggaaaggtggtctcccgtacagaggatgtggacatggaggtcccgcaaaaatag
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