Coregonus clupeaformis (lake whitefish): 121534054
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Entry
121534054 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 57-like
KO
K24729
cilia- and flagella-associated protein 57
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121534054
Cilium and associated proteins [BR:
cclu03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
121534054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_Vps41
EIF3I
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
TMF_DNA_bd
ADIP
VPS11_N
DUF1912
Motif
Other DBs
NCBI-GeneID:
121534054
NCBI-ProteinID:
XP_045061382
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All DBs
Position
20:complement(26102570..26139164)
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AA seq
1235 aa
AA seq
DB search
MSAVVAQCHYSFGLRTCVANNLCYFDEQTVIFPSGNNCVRYNIDQKWQRFIPGLERSQGM
YALAISSNRRYLAVSERGERATITVYDLQHEQSRKRKVLSGGDIPVHEFVSMAFSTDSKY
FISQSGAPDYTLFYWMWEKQKIMAMVKTTVAANPVTQVSLNPYDNTQICVSGNGVFKLFR
YAEGALKQSTFQKLETHHLLSHAWVSEERVIAGTEAGRLMVFESGDLXWDMSVSPKTTIS
KQMLLTHCESDHVLQFSQFLTFCSAKGNDEESLPQLPRVTVITAYSKGFACSAGPGTVCL
FERTDDKDNYRKTREIRIPPDQCSHEPSQAEQQQIVSLVISPSEETMVTSTDRGQLYIIT
LSSAEMSKGEQAQFEFLSYSFHSGSITGLSICIRKPFIATCSLDQSVRIWNFETNTLELY
KEFQEEAFSIALHPSGLFVLVGFSDKLRLMNLLIDDIRTFKEFNIRGCRECAFSHGGHLF
AAVNGNVIHIYSSTTFESVLNLKGHNGKVHSIVWSGDDSRLVSCGMDGAVYEWNTLTSKR
ESESILKSCSYTGVTVSPDAKTIFAVGTDCTLKEIQDCQILREVPAEDVAYTTITMSRSG
RTLFTGTSIGTIRAIKYPLSIQKDWIEYQAHSSTVTKMVITFDDQYLLTVSEDGCLLIWK
IIDKEGRGLKRDKDITYAEEILITKSDLEEKNQVMLELKTRVEELKMENEYQLRLKDMNY
NEDIKEMSAKFVEQIESLKTKRQILKTERSKMESANQEAMFGVTEKHSKELQDLGSANSQ
KLILEYEKYQELQLKSQQIQQDYEEQLQQMDESKASALEDLTLHYEGKLHEMLLVLEQCQ
EESRIQGREFEESRKQMEEDGDREIQDIRIRYERWLKDERETNMRLKGDTGIMKKKFSSL
QKNIDDRSVEKEKMKSEQQKLLAHQKCLEKDILALKKEIQERDETIQDKEKCIYDLKKKN
QELEKFKFVLDYKIKELKKQIEPRENEIKEMKEQTHEMEQELDTFHKKNAQQELDIAELK
LKLHTTDKEMHKGLQKVRDVEALVRRFRTDLHNCVGFIQEPERLKDSIRDLYDRYVQKTD
VVDIVGVDTDIQREYARHREHLERNVASLKRKLAKDGVVHHADNVKILQENATLIREIND
LRQELRLVRSQVHDYKSLMRKQGKKQTNTLKALLSPRANPSNMVVHLNQEEEGDRIVQLQ
RLEIHRLREEIQVLMKIHPYRPPSTVKLPSLQINS
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagtggtggcccagtgtcactacagctttggtctgcggacatgcgtggcaaat
aacctgtgctactttgatgagcagactgtcatcttcccatctgggaacaactgtgttcgt
tacaacatcgatcagaaatggcagaggttcatcccaggtttggagaggagtcaggggatg
tacgcgctggccatcagctcaaaccgccgctacctggcggtgtcggagcgtggcgagagg
gccaccatcaccgtgtacgacctgcagcacgagcagagccggaagaggaaggtgctgagc
ggaggggacatccctgtccatgagtttgtctccatggcgttctccaccgactccaagtac
ttcatcagccagtcaggggcgccggactacaccctcttctactggatgtgggagaagcag
aagatcatggccatggtgaagaccactgtggccgctaacccagtcacccaggtcagcttg
aacccatatgacaacacccagatctgtgtgagtgggaatggggtcttcaagctgttccgc
tatgcagagggggctctgaagcagtccaccttccagaagctagagacgcatcatttgttg
tcccatgcctgggtgtctgaggagagggtgatagctgggacagaggcaggcaggctgatg
gtgtttgagtctggagacctgtgatgggatatgagtgtgtcccccaagaccaccatctcc
aaacagatgttactcacacattgtgagagtgaccatgttttacagttttcacaatttttg
actttttgcagcgcaaagggaaatgatgaagagtcccttcctcagttgccccgggttaca
gtcattacagcgtactccaaaggctttgcctgctcggccggtcctgggacggtgtgtctg
tttgagagaaccgacgataaggacaactacaggaaaaccagggagataaggatcccccca
gaccagtgcagccacgagcccagccaggcagagcaacagcagattgtctctctggtcatc
agtccgtcagaggagactatggtgaccagtacagaccgtggtcagctctacattatcacc
ctgtcctctgctgagatgagcaagggggagcaggctcagtttgagtttctgtcctattcc
ttccactccgggtctatcactggtctgtccatctgcatccgtaagcccttcatcgctacc
tgttccctggaccagtctgtacgcatctggaacttcgagaccaacaccctggaactgtat
aaggagttccaggaggaggcgttcagcatcgccctgcacccctctggcctgtttgtcctg
gtgggcttctctgacaagctgaggctcatgaatctcctcatagacgacatcaggaccttc
aaggagttcaacatccgaggctgtagagagtgtgccttcagtcacggaggacacctgttt
gctgcagtgaatggaaacgtcattcacatctactccagcaccaccttcgagagcgtcctc
aacctcaagggacacaatgggaaggtgcactccatagtctggagcggtgacgacagcagg
ctggtgtcgtgtgggatggatggggctgtgtacgagtggaacaccctgaccagcaagcgg
gagtcggagagcatactaaagtcctgcagctacaccggcgtcaccgtctcccccgacgcc
aagactatcttcgccgtggggaccgactgtaccctgaaagagatccaggactgtcaaatc
ctgcgtgaggtgcctgctgaagacgtggcctacaccaccatcaccatgtcccggtccgga
cgcacgctcttcaccgggacctctatcggaaccatcagggccatcaagtaccccctgtct
atccagaaggactggatcgagtatcaggcccactcttcaactgtcaccaaaatggtgatc
acgtttgacgaccagtacctgctgacggtgtctgaggacggctgtctgctcatctggaag
atcatagacaaggagggccgtggcctgaagagagacaaggacatcacctacgctgaggag
atcctcatcaccaagtcagacctggaggagaagaaccaggttatgctggagctgaagacc
cgtgtggaggagctgaagatggagaatgagtaccagctccgtctgaaggacatgaactac
aacgaggacatcaaagagatgtcagctaagtttgttgagcagatagagtcgctcaagact
aagagacagatcctgaagacggaacgaagcaagatggagtcagccaatcaggaggccatg
ttcggggtgacggagaaacactccaaagagctgcaggatctggggtcagccaacagtcag
aagctgattctggagtatgagaagtaccaggagctgcagctcaagtctcagcagatacag
caggactacgaggaacagctgcagcagatggacgagagcaaggcatctgccctggaggat
ctcaccctccactatgaggggaagctgcatgagatgctgctggtgttggagcagtgtcag
gaggagtctcgtatccaggggagggagtttgaggagagcaggaagcagatggaggaggat
ggagacagggaaatccaggacatcaggatccgctatgagagatggctgaaggacgagagg
gagaccaacatgcgcctgaagggagacaccggcatcatgaagaagaagttcagcagcctg
cagaagaatatagatgacaggagcgtggagaaagagaagatgaagtcagagcaacagaag
ctactggcacatcagaagtgtctggagaaagacatcctggccctgaagaaagagatccag
gagagggatgagaccatccaggataaggagaaatgcatatacgacctgaaaaagaagaac
caggagctggagaagtttaagtttgttctggactacaagatcaaagaactgaagaaacag
atcgagcccagagagaacgaaatcaaggagatgaaggagcagacccatgagatggagcag
gaactggataccttccacaagaagaacgctcaacaggaactggacatcgctgagctgaag
ctcaaactccacaccaccgacaaggagatgcacaagggactgcagaaggtgagggatgtg
gaggccctggtacgtaggttcaggacggacctccataactgtgtgggcttcatccaggag
cctgagaggctaaaggacagcataagagacctctacgaccgctatgtacagaagactgat
gtggtggatatagttggtgtggacacagacatccagagggagtacgcccggcacagggag
cacctggagaggaacgtggcgtccctgaagaggaagctggccaaagacggcgtggtccac
catgctgacaacgtcaagatcctgcaggagaatgcaactctgatcagagagataaatgat
ctgagacaggagttgcgtctggtgcgttcccaggtccacgactacaagagtctgatgaga
aagcagggcaagaagcagaccaacactctcaaagcgctgctatctcccagggccaacccc
agtaacatggtggtccatctgaaccaggaggaggagggggaccgtatcgttcagctgcag
cgcctggagatccacaggctcagggaggagatccaggtcctgatgaagatacacccttat
agaccaccctccaccgtcaagctaccctccctccaaatcaactcataa
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