Coregonus clupeaformis (lake whitefish): 121534058
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Entry
121534058 CDS
T08357
Symbol
orc1
Name
(RefSeq) origin recognition complex subunit 1 isoform X2
KO
K02603
origin recognition complex subunit 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121534058 (orc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cclu03032
]
121534058 (orc1)
03036 Chromosome and associated proteins [BR:
cclu03036
]
121534058 (orc1)
DNA replication proteins [BR:
cclu03032
]
Eukaryotic type
DNA Replication Initiation Factors
pre-RC (pre-replication complex)
121534058 (orc1)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
121534058 (orc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHD_Cdc6
AAA
BAH
AAA_16
AAA_22
AAA_lid_10
Cdc6-ORC-like_ATPase_lid
AAA_19
Cdc6_lid
SLFN-g3_helicase
NPHP3_N
TniB
NACHT
AAA_30
PIF1
Spectrin_Dys-1
AAA_11
Motif
Other DBs
NCBI-GeneID:
121534058
NCBI-ProteinID:
XP_041696424
LinkDB
All DBs
Position
20:25980241..25990317
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AA seq
964 aa
AA seq
DB search
MVRYFTRLRVRRIYKWGGRPTNFDRKFKSFVFDYLKISVEGQEGVTTVTPGQYILIEGDD
DDNPFVAKLLKFFGDESHKQKKALVQWFVRLSEVPRNKKKLLGRSPHPQEIFYYLGRGCD
DEINAESILGTVHVQHVPEDTPFPEPGTKDTLYVKLSWNTKAFNVLDPVLMQDTPASPPP
KPALPQFPPCSSPVAAPVSRGPVRHTLPTPDPTVMRRAGSVSDTRATMSAGKMVTREAES
SHSASKLSASKILSAKRRDSAADTPGVRKKLHLSIGSSPGKIMTREDDLCELLAEEVESE
KVLALKLSSSVSHSLQHGYSLSPMRSGRKTPNGQGGFPRKTASISLDRLSPTALGEQDFS
SDLLLAVSPLALEDDVFEAGLPTDSGSAKTPKKRQATPRRNYVRGQKATTPSRRKESAMT
MREPALGVLAEEDFENSPKQPIAMTPRSKRKSAQLVSSRIRKQLNLMDNTQELNSDGEED
DDDDDCFVPSKKDLQSSSDEEMEEEQAESEEETVVRKTRGRPQKTPARTPIKTLSKKVNP
STPRTPRHATPSTHRTPRHATPSTPRTPRHATPSIPSRTIPARQPGNVLEDARARLHVSA
VPESLPCREQEFQDIYNFVESKVMDGTGGCMYISGVPGTGKTATVHEVIRCLQHASDMDE
IPTFRFIEINGMKMTDPHQAYVQILQKLTDQKATADHAAALLEKRFSNPAPKKETTVLLV
DELDLLWTRKQNVMYNLFDWPTRRHARLVVLTIANTMDLPERIMINRVASRLGLTRMSFQ
PYSFKQLQQIIMSRLNKVKAFEEDAMQLVSRKVAALSGDARRCLDICRRATEICEHAASH
PSSTGLVGISHVMEALDEMFSSSYITAIRCASLQEQLFLRAVIAEFRRLGLEEATFQQVF
VQHRALCRVDGLQPISVSEGLAVCQRLGACRLLLLEASRLDVLQRVRLNVSQDDVLYALK
AVRD
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggtccgctactttacaagattgagagtaagacgtatctacaaatggggcggaagaccg
actaacttcgacagaaaatttaagagttttgtctttgattatttgaaaattagtgtggag
ggtcaggagggagtcaccactgtaacccctggccagtacatcctcattgagggagatgat
gatgacaacccattcgttgccaagcttctcaagttctttggcgatgagtcccacaagcag
aagaaggcgctggtgcagtggtttgtgcgcttgtctgaggtgccccgcaacaagaagaag
ctgctgggcaggagtccccacccccaggagatcttctactatctgggacgtggctgtgac
gatgagatcaacgcagagtccatccttggcactgtgcatgtccagcacgtccctgaagat
actccttttccagagcctggaaccaaggacaccctctatgtgaagctgtcctggaacacc
aaggccttcaatgtcttagaccctgtcctgatgcaggatacccctgcctcaccccctccc
aaacctgctctccctcagtttcccccctgttcttcccccgtggcagcccctgtgtctcgg
ggcccagtgcgtcataccctgcccaccccggaccccacagtgatgaggagagcagggtct
gtgtctgacactagagccaccatgagcgccggaaagatggtcacccgcgaggcagagtcg
agccactctgcctccaagctctctgcctctaaaattctgagcgccaagaggagggacagc
gctgcagacacaccgggtgtacgcaagaaactacacctcagcatcgggtccagtccaggg
aagataatgaccagagaagatgacctctgtgagctcttggctgaagaggtggagtcagag
aaagttctggccctcaaactgagctcctcagtttcacactccctccagcatggctacagc
ctctcccccatgagaagtggccgcaagacccctaacggccagggggggttcccccggaag
accgcctccatcagcctggacagactgtctcctactgctctgggagaacaggacttctcc
agtgacctgttgctggctgtgtctcccctggccctagaggatgacgtatttgaggcaggg
ttacctacagactctggctctgccaagacccccaagaagagacaggccacccccaggagg
aactatgttagggggcagaaagctaccaccccctccaggaggaaagagtccgccatgacc
atgagagagccggctctgggggtgctggcggaggaggactttgagaactctcccaagcag
ccgattgccatgacgcctcgctccaagaggaagtcagcccagctggtgtcatcacgtatc
aggaagcagttgaatctgatggacaatacccaggagctaaactccgatggagaggaagat
gatgatgatgatgactgtttcgttccctccaagaaggacctacagagcagcagcgatgaa
gagatggaggaagagcaggcagagagtgaggaagagaccgtggtgaggaagaccagagga
agacctcaaaagacccccgccaggaccccaatcaaaacgctcagcaagaaagtcaacccc
agtaccccccggaccccccgtcatgccactcctagtacccaccggaccccccgtcatgcc
actcccagtaccccccggaccccccgtcatgccactcctagtattcccagccggactatt
ccagccaggcagcctgggaacgtcctggaggacgccagggctaggctgcatgtgtcggca
gtaccagagtctcttccctgtagggagcaggagttccaggatatctataactttgtggag
agcaaggtcatggacgggaccggagggtgtatgtacatctctggtgttccgggaactggg
aaaaccgccactgtccacgaggttatccgctgtctacagcacgcctctgatatggatgaa
atccccacgttccgattcattgagatcaatggcatgaaaatgacagaccctcaccaggcc
tacgtccagattctacagaaactgacagaccagaaggcgacagctgaccacgctgcagcc
ctattggagaagaggttcagtaaccccgcccccaagaaggagaccaccgtgctactggtg
gacgagctggacctgctgtggaccaggaagcagaatgtcatgtacaacctgtttgattgg
ccgacgcggcgccacgcccgcctggtggtgctgaccatcgccaacaccatggacctgccc
gagaggatcatgatcaacagggtggccagcagactgggcctgaccaggatgtcattccag
ccatacagcttcaagcagctgcagcagatcatcatgtccagactgaacaaggtcaaggcc
ttcgaggaggacgctatgcagctggtctccagaaaggtggcagcgttgtcaggagatgcc
cgacgctgtctggacatctgtcgtcgcgccactgagatctgcgaacacgccgcctcgcac
ccgtcctccacgggattggtgggaattagtcatgtgatggaggcgctggatgagatgttc
tcctcctcctacatcacagccatcaggtgtgcatcgttgcaggagcagctcttcctgagg
gcggtcattgctgagttcaggcggctgggactggaggaggccactttccaacaggtgttt
gtgcagcaccgggctctgtgtcgtgtggatggcctgcagcccatcagcgtgtccgagggt
ctggcagtgtgtcagcgtctgggggcgtgtcgtctgctgctgctggaggccagccgtcta
gacgtgctacagcgggtcagactcaacgtcagccaggatgacgtgctctacgcactcaaa
gctgtcagagactga
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