Coregonus clupeaformis (lake whitefish): 121534071
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Entry
121534071 CDS
T08357
Symbol
elp1
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121534071 (elp1)
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
121534071 (elp1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
TPR_GEMI5
Beta-prop_NUP159_NUP214
TPR_9
Motif
Other DBs
NCBI-GeneID:
121534071
NCBI-ProteinID:
XP_041696458
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Position
2:18261406..18275615
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AA seq
1321 aa
AA seq
DB search
MRNLRLLKSLRCLELQGPGTPQCFSVRTDTGTVLIASEYSVTELDTRAGQVVNEVSLTAE
SYLPEDGSGTVVGIQDLPDQESVCVATATGDVILYNLNTNQLECVGSVGSGLSAMSWSPD
QELVTLTTGQDTIIMMTKDFEPITEVGIHQDDFGEGKFITVGWGKKETQFHGSEGKHAAQ
RKTIEVQPAMSWDDRRPRVTWRGDGQLFAVSAVCPQTGARKVRVWNRECVLQSTSETVNG
LEQSLCWKPSGSLIAATQRHPNKHSVVFMEKNGLLHGDFTLPFGKEQVKVKELLWNSDST
VLAVWLEDMTPGEGGQVNTYIQLWTVGNYHWYLKQNLYFGSDPQRAPAYVSWDPERPLRL
HLVTRGWASLNYDWGWSTDRSHGEDGQDNANVAVIDGDKVLVSTFRQCVVPPPMCAYDLQ
LPAPVNLVTFQRQSTNELAALTADGHISVYGQGTGEQSEPAAGLRGFRSVTHPPQLKTTY
RVAVDQEEPLALRLLLWLSDDVFLGVVGCTEGPSQSKLLILGPSEAQGPQPTLEIRSHVE
VEGHVISMCHSSKTGTVALQLEDGQIRKFLWDSLKPSVVEWQDSTGCRINFPDPCVQTAL
FTIEEEHLLGLTDRSHLFVGETEVASNVSSFVVYDDFLLLTTHSHTCRCLRLSTLTVKGL
QVALAADGQNQNDQNDETLRRVERGSRIVTVVPQDTRLILQMPRGNLETIHHRALVLAQL
RKWLDSQKFREAFECMRKLRINLNLIYDHSPKVFLESVETFLRQLDSINHINLFLTELKE
EDTTTTMYPCSVNTTGQSAPVACGKKVDIVCDALRCTMESMDQHKYCLSILTSHVKKTVP
ELEIALQKVHELRVNPPSAANAVSAEEALKYLLFLVNVNELYEHSLGTYDFDLVLMVAEK
SQKDPKEYLPFLNMLKTLEPNYQRYTIDKHLKRYRKALHHLSKCGEEHFNETLNLVKDQR
LYSEALGLYPTDSPQYKALSCAYAEYLVEQQQAEQAGLLLWRCGEATRALQAFVGSASWR
NALCVAEQIPLPSDQLALLARDLAEKLIELRRYTEAAILLERYAKDCEEAISALITGAVW
EEALRLVYLYNRQDIIETNLKPALLEACSSQTSYLEVQRAMFTRHKTRLAVVRELKEKAR
LELLDEDVPDCPEAELYSEASSVMTGSHAGSKYSHSNSRISSRSSKNRRKAERKKLSLKE
GSPLEDMALLHALAEIIHSVDKMREEVHSLLKALVLFQFDGQAGRLQQAYGEALQMIEVA
LPEVWQEGLQQTQAPITGPNSTANSIMASFQQPRPSATQDSETPPPPKMRNGVKWKLSIL
K
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgcggaacttgaggttgctgaagagccttcgttgcttggagctgcaaggcccaggcacg
ccgcaatgtttctctgttcggacggacacaggcacggtgctcatcgcttcagaatactcc
gtcacagagttggacacacgagctggccaggtggtgaatgaggtgtcattgacagctgag
agctatcttccagaggatggcagtgggacagttgttggtatccaagacttaccagaccag
gagtcagtgtgtgtggctacagccactggtgatgtcattctctacaacctgaacactaac
cagctggagtgtgtgggcagtgtgggcagtggtctgtcagccatgagctggagcccggac
caggagttggtcactctcaccactggtcaggacaccattatcatgatgaccaaagacttt
gaacccatcacagaggttgggatccatcaggatgactttggagaggggaagtttatcaca
gtgggctgggggaagaaagagacccagttccatggctcagagggcaagcatgctgcccag
aggaagactatagaggtgcagccggccatgtcgtgggacgaccgcaggccaagggtgacg
tggagaggagacgggcagctcttcgctgtgagcgctgtttgcccccagactggtgccaga
aaggtcagagtgtggaacagagagtgtgtcttacagtcgacaagtgaaaccgtcaacggt
ctggagcagtcactgtgttggaaaccgtcgggtagtttgatagcagccacgcagcgtcat
cctaacaagcacagtgtggtgtttatggagaagaacggcctcctacacggggacttcacc
ctgccctttggcaaagaacaggtcaaggtgaaggagctgctatggaacagtgactccact
gtgttggctgtgtggctggaagatatgacaccaggagagggcggtcaagtcaacacatac
attcagctgtggacagtaggtaactaccactggtacctgaagcagaacctgtactttggc
agcgacccccagagggcaccagcctacgtgagctgggatcctgagaggcccctgcggctg
cacctggtgacccgaggctgggccagcctgaactacgactggggctggagcaccgaccgc
agccacggggaggacgggcaggacaacgccaacgtggccgtgattgacggggataaggtc
ctagtgtcaacgtttcgtcagtgtgtggtgcccccgcccatgtgtgcctacgaccttcag
ctgcccgcccccgtcaacctggtgaccttccagcgccagagcaccaatgagctggcagcg
ctcacagccgacggacacatctctgtctatggccaaggtactggggaacagagtgagcct
gcagccggattgagaggattccgatctgtcacacaccctccccagctaaagacaacttac
agggttgcggtggatcaggaggagcccctggctctgcgtctgctgctgtggctgagtgat
gatgtgttcctgggggtggtgggctgtacagaggggccgtcccagtccaagctgctcatc
ctgggaccctcagaggcccagggcccccagccaaccttggagatcaggtcacatgtggag
gtggaaggtcacgtgatcagcatgtgtcacagctccaagacgggcacggtggcattgcag
ctggaggatggtcagatcaggaagttcctctgggactctctgaagcctagtgttgtggag
tggcaggactcaacaggctgccgaatcaactttccagatccctgtgtgcagacggccctc
tttaccatagaagaggagcatctgctagggcttacggaccgatctcacctgtttgttggc
gagacagaggtggcctccaacgtttcctccttcgtggtctacgatgacttcctgctgctc
accacacactcgcacacatgccgctgcctccgactcagcacactcactgtcaaagggctg
caggtggccttggctgcagacggtcagaatcagaatgaccagaatgacgagactctccgc
agggtggagaggggctccagaatcgtcactgtggtgccccaggacaccaggctcatccta
cagatgcctcgcggtaacctggagaccatccaccatcgagcgctagtattggctcagctc
agaaagtggctggacagtcagaagttcagagaggcctttgagtgcatgaggaagctgcgg
atcaacctcaacctgatctacgaccacagccccaaggtgtttttggaaagcgtggagacc
ttcctgagacagctagactctatcaatcacatcaacctgttcctcacagagctcaaggag
gaagataccactacaacaatgtacccttgttcagtgaacactacaggccagtcagcccct
gtggcttgtgggaaaaaggtggatattgtgtgtgatgcgttgcgctgcaccatggaatct
atggaccagcacaagtattgtctgtctattttgacgtcacatgtgaagaagactgttcct
gagctggagattgccctgcagaaagtccacgagcttagagtgaacccacccagtgctgcc
aacgcagtgagtgcggaggaggctctgaagtacctgttgttcctggtcaatgtcaacgag
ctgtatgaacactctctgggcacctacgactttgacttggtcctcatggtggccgagaag
tcccaaaaggaccccaaagagtaccttcccttcctgaacatgctgaagacattagagccc
aattaccagcgctacaccatcgacaaacacctcaagagatacaggaaggccctgcatcac
ctcagcaagtgtggtgaggagcacttcaacgagaccctaaatctggtgaaggaccagagg
ctgtatagtgaagccctggggctctacccaacagacagccctcagtacaaggcgctgagt
tgtgcctatgccgagtacctggtggagcagcagcaggcggagcaggcagggttgttgctg
tggcgctgcggcgaggcgacccgcgccctccaggcctttgtgggcagtgccagctggagg
aacgccctctgtgtggcagagcagatcccgctgccatccgaccagctggcactgctggcc
agggacctggcagagaaactgatagagctcagaagatatacggaggcggccatattgttg
gagcggtatgccaaggactgtgaggaggccatatcagctctaatcacaggtgcagtctgg
gaagaagcacttcgactggtgtatttgtacaacagacaagacataattgaaacaaacctc
aaaccagctctcttggaagcatgtagttctcagacctcctacctggaagttcagagggcg
atgttcactcgtcacaaaacccgtctggctgtggtacgggagcttaaggaaaaagccagg
ctggagttactggatgaggatgtcccagactgtccagaggcagagctctactcagaggcc
agtagtgtgatgacaggcagccatgccggctccaagtactcacatagtaactcccgcatc
tcctcgaggtcatctaagaaccgccggaaggccgagcgcaagaagctgagtctgaaggaa
gggagccccctagaggacatggccctactgcacgccctggcagagatcatccactctgtg
gacaagatgagagaggaggtgcacagcctgctgaaagccctggtgctgttccagtttgac
ggacaggcggggaggctgcaacaggcctatggggaggctctccaaatgatagaggtggcc
cttcctgaggtgtggcaggagggtcttcagcagacccaggccccgatcacaggtcctaac
tccacagccaacagcatcatggcttcatttcaacagccaagaccctcagcaacccaagat
tcagagaccccaccacccccaaagatgagaaatggtgtcaagtggaagctgagtattctg
aagtag
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