Coregonus clupeaformis (lake whitefish): 121534084
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Entry
121534084 CDS
T08357
Name
(RefSeq) LIM/homeobox protein Lhx9 isoform X1
KO
K09373
LIM homeobox protein 2/9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121534084
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
121534084
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121534084
NCBI-ProteinID:
XP_041696470
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Position
20:complement(20687326..20701177)
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AA seq
418 aa
AA seq
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MPVSQQNQSDALSLPDAELYMEVVGYKAGTSCCTLRRSRAGAMLFHGISGDHIQGIMEEM
ERRSKTDSRLAKGVRLNGREATMPSMGPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLK
CCECKQHLESELTCFAKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDSVYHLS
CFTCTTCNKTLTTGDHFGMKDSLVYCRVHFETIAQGEYPHPGLNYAEMAAKGGGLALPYF
NGTGTAQKGRPRKRKSPAMGIDITSYNSGCNENDGDHLDRDQAYPPSQKNKRMRTSFKHH
QLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNVLRQENGVDKAD
GTSLPPPSSDNGALTPPSSTATLTDLTNPSITVVTSVTSSLDSHDSGSPSQTTLTNLF
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtctcgcagcagaaccagtcggatgctctgagcctacccgacgcagagctgtat
atggaagttgtgggctacaaggcaggaacgagctgttgcacattgcgtcgttcaagagcg
ggagccatgctgttccacgggatctccggtgaccacatccagggcatcatggaggagatg
gagaggagatccaaaaccgactcgcgcctggccaagggcgtgcggctcaacggaagggaa
gcgaccatgccttccatgggccctgagaagcccgcgttgtgtgccggctgtggaggcaaa
atctcggatagatattatctgctcgctgtggacaaacaatggcacctacggtgcctcaaa
tgctgtgaatgtaaacagcatttggagtcagagctcacgtgtttcgccaaggatggcagc
atctactgcaaagaggattactacagaaggttctcggtgcagaggtgcgcacgctgccac
ctcgggatctcggcatctgagatggtgatgcgcgcgagggactccgtgtaccacctgagc
tgcttcacgtgcaccacgtgcaacaagaccctgaccaccggcgaccacttcggcatgaaa
gacagcctggtgtactgccgggtccacttcgagaccatagcccagggagagtacccgcac
cctggcctcaactatgccgagatggcggctaaaggtggaggtctggcgctgccatacttc
aatggcactggaacagctcagaagggaaggcctcggaagaggaagagccccgccatgggc
atagacatcaccagctacaactcaggttgtaatgagaatgatggggaccacctggaccgt
gaccaggcctaccctccctcccagaagaacaagcgcatgcgcacctccttcaagcaccac
cagctccgcaccatgaagtcctactttgctatcaaccacaacccagacgccaaggacctg
aaacagctggcccagaagacaggcctcaccaaaagagttctacaggtatggttccaaaac
gcaagagccaaattcagaaggaacgttttgcgtcaggagaatggtgttgacaaggccgac
ggcacgtcactccctccaccctcgtccgacaacggcgctctgacacccccctccagcacg
gccacactaacagacctgaccaatccctctatcactgtagtgacctccgtcacgtctagt
ttggacagccatgattcggggagcccctcacagactaccttgacaaaccttttctag
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