Coregonus clupeaformis (lake whitefish): 121534106
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Entry
121534106 CDS
T08357
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03272
Virion - Hepatitis viruses
cclu04514
Cell adhesion molecules
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121534106
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121534106
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121534106
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121534106
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121534106
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
DASH_Dad1
DUF349
DASH_Dad2
PRP1_N
Motif
Other DBs
NCBI-GeneID:
121534106
NCBI-ProteinID:
XP_041696501
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Position
20:complement(21431403..21458864)
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AA seq
550 aa
AA seq
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MFEKQRYDSPPVYSPPYSPASNGYGPPQSYHPPRSEFDPYPPPPGSYYMEEKPQHFYKWL
SPPGIVKAMFGTIIVLCVGIFACVASTLVWDMQYGMGGMGSYGGGMGYGGGYGGMGGGYG
SSYGSGYGGGYGGGYGGGYGNYGNSYPTPYSAKTTMIAMAAINFFVALGFFVASFSKSTT
FRSRKFFLVVLVVSVIMAVIQGIITIVYIVGVNPMAQSSQNMMYNPMLLMCQNLYGSSYS
NMGGVGGFGMYNQYLYHYCYVDPQEGVAMVCGFLVTAALVVAAFFSHKTRGKIWRYGKPN
IYWEQPPETGGLVSEGRDVKDWVNNVEDGQSTEDAPTVVLSEKSVPLNASANSIISYPTK
ADSRVYTGDTYNNNVYSEHLASRPSDQPSQGASSSPSEEAGGVRKPSAKRGKRSRRNPEL
DESQYETEYTTGGETGNELDPEEWESVYPEIMSDGQRQEYKREFDADLREYKHLCAEMDD
ISDQMNKLSRQLDTLDETSAQYQVVAEEYNRLKDVKRTPDYQAKKLECRRLRHKLFHIKR
VVKAYDKSLS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaagcagcgttacgacagccctcccgtctacagtcctccatacagcccggcc
tccaatggctacggccccccacaaagctaccacccgcccaggagtgagtttgacccctac
ccacccccaccgggctcctactacatggaagagaagccccaacacttctacaagtggctc
tctcctcctggcatcgtcaaggccatgtttggcaccatcatagtgctctgtgtggggatc
tttgcctgtgtggcctccacgctggtctgggacatgcagtacgggatgggggggatgggc
tcctacggcggagggatgggctatggcggtggttatgggggaatgggcggcggttatggc
tccagctacggctctggctatggaggaggctatggaggaggctatggaggaggctatggt
aactatggtaactcctacccgacaccttactcggccaaaaccaccatgatagctatggcg
gccatcaacttctttgtggcgctgggattcttcgtggccagtttctctaaatcgaccacg
ttcaggagcaggaagttctttctggtggttctggtggtcagcgtcatcatggctgtcatc
cagggcatcatcaccattgtgtacatcgtgggggtgaacccaatggcccagagctctcag
aacatgatgtacaaccccatgctgttgatgtgccagaacctgtacggaagcagctattct
aatatgggaggagtcgggggtttcggcatgtataaccagtacctctatcactactgctac
gtggacccacaagagggtgtagccatggtgtgtgggttcctggttaccgctgcgttggtc
gtggctgctttcttctcacacaaaaccagaggcaagatctggcgctacggcaagcccaac
atctactgggaacagccccctgagactggaggcctagtttctgaaggcagagatgtgaag
gactgggttaacaatgtggaggacggacaaagtacagaggatgcacctaccgtggtgctg
tcagagaagtccgtccccctcaatgcctcagccaatagcatcatctcctacccaaccaag
gctgacagcagggtatacactggagacacttacaacaacaatgtgtattcggagcatctg
gctagccgtccctcggaccagccctcccagggggccagttccagcccctctgaggaggca
gggggggtcaggaagccctcggccaaaaggggcaagaggagccggcgcaaccctgagctg
gacgaatcacagtacgaaaccgagtacaccacgggaggagagactggcaacgaactggac
ccagaggagtgggagagcgtctacccagagataatgtcagacggccagcgtcaggagtac
aagagggagtttgatgccgacctgagggagtacaaacacctgtgtgctgagatggacgac
atcagtgaccagatgaacaaactcagcaggcagctggacacactggacgagacctccgcc
cagtaccaggttgtggcagaggaatataatcgactgaaagacgttaagaggacaccagac
taccaggctaagaagttggagtgtcgcaggctgagacacaaactgttccatatcaaacgt
gtggtcaaggcctacgacaagagcctttcttaa
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