Coregonus clupeaformis (lake whitefish): 121534149
Help
Entry
121534149 CDS
T08357
Name
(RefSeq) volume-regulated anion channel subunit LRRC8A
KO
K22038
volume-regulated anion channel
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121534149
Ion channels [BR:
cclu04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
121534149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_At5g56370
LRR_9
LRR_R13L1-DRL21
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
121534149
NCBI-ProteinID:
XP_041696600
LinkDB
All DBs
Position
20:54288689..54297760
Genome browser
AA seq
821 aa
AA seq
DB search
MLSEGELKDFAQGQSLYRVLQPWWDVFSHYLSIMMFSIGTLGGTLQVTLRKIVCVPCQMT
SDDFCGGFNRRGTTSGNATTEASFPLLPKSLYKLDLQQYAYVDAVCYEQQLHWFAKFFPY
VVMLETLALVIISNLWFKYPRTSSRLMHFVSILHKCCDSPWTTRALSETVAEQGGAQPSM
SVCSPDPQASSTSDYSSRRLMGTEFLSVLDKKEGEQAKAIFEKVKKLKVHVEDKDIIYHL
YMRQIVTKIVFLLFTLAYIPYAASHILFDVDCVVDSQALMPFQPFRCVHSLATFFWLLSL
VYTVLMVMYSLTCFYSFWWMMRNSLREYSFDPVREESSFSDIPDVKNDFAFILHLLDQYN
PLFSKRFAVFLSEVSEKKLRQLNLNYMWPLEKLTQKVVRNAQDQIELHLMLLSGIPEAVF
DIRELEVLKLQMIPDARLTQKLTQLGNLREIWLDHSPATVDLMALGFLSENLRILRMKFT
EVEQAPWWVFSLRNLTELYLYGNMFNQDNTTFVNGLPKLKNLKVLFIKCSITAMPKVITN
SIPSIQKLFVDNEGTQLSVLQSLKTMSQLTCLELLNCDLQRIPSHIFSLKNLQEIDLKGN
NLKTIEEIISFQHLPKLSTLKLKYNSIAYIPVHVGVLGNLEQLHLGHNLISRVPAQLFLC
SRLYMLDLSHNKLSAIPTEIKDLKRLQLLNVSSNNIDHLPEGLFQCKTLQSLLLGHNNLS
VVPHQVSELTNLVVLDLRGNQLESLPAELEECHSLMPSGLLVEEGLLNSLPPSVKEGFQR
LDKEYLGKMEAEGVGNALNCNPIICNKAGHGDTACGLIYSM
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgctctctgaaggtgagctgaaggactttgcccagggccagtccctgtaccgtgttctc
cagccctggtgggatgtcttcagccactatctctccatcatgatgttctcaatcggaacc
ctcggaggaaccctgcaggtcaccctccgcaagatcgtctgcgtcccctgtcagatgaca
tcagatgacttctgtgggggttttaaccgtagaggcactacatcagggaatgccactact
gaagccagcttccctctcctacccaagagtctttacaagctggaccttcagcagtatgct
tacgttgacgccgtgtgctacgaacaacaactccactggttcgccaagttcttcccctac
gttgtgatgttagagactctggctcttgtgattataagcaacttgtggttcaagtaccct
aggaccagctccagactcatgcactttgtctccattctacacaaatgctgcgactctccc
tggaccacccgggccttgtcagagacggtggcagagcagggtggggcccagccctcaatg
agcgtgtgtagtcccgatcctcaggcatcttcaacatcagactatagcagcaggaggctg
atgggcacagagtttcttagtgttctagacaaaaaggaaggtgagcaggccaaagctatc
tttgagaaggtgaagaaactgaaagtacatgtggaggacaaagacatcatttatcacttg
tatatgaggcagatagtcaccaagattgtgtttctgctgttcaccttggcctacatccct
tacgcagcctcacacatcctgtttgacgttgactgcgtggtggattcccaagcgctgatg
ccgtttcagccctttcgctgcgttcactcgttggccacctttttctggctcctctctttg
gtttacacggtactgatggtcatgtacagcttgacctgcttctacagcttctggtggatg
atgagaaactctctcagggagtactcctttgacccggtgagggaggagagcagcttcagc
gacatccccgatgtcaagaatgactttgccttcatcctccacctcctggaccagtataac
cctctgttctctaaacgctttgcagtcttcctctcggaggtcagtgagaagaaactgagg
cagctcaacctgaactacatgtggcctttggagaagctgacccagaaggtggtgcgtaac
gctcaggaccagatagagctccatctcatgctcctcagcggcatcccagaggctgtgttc
gatatcagggagctggaggtgctcaagctgcagatgatcccggacgctaggctcacgcag
aagcttacgcagcttgggaacctgcgagagatctggctggatcattctcctgccactgta
gacctcatggctctggggtttctctctgagaacctgaggatcctgaggatgaagttcaca
gaggtggaacaggctccctggtgggttttcagtttgcggaacctgactgagctctatctg
tatgggaatatgttcaatcaggacaacacgacgttcgtcaacggcctacccaagctcaag
aatctgaaggtgttattcatcaagtgcagcatcaccgcgatgccgaaagtgattaccaac
tcaataccctcgatacagaagcttttcgtcgacaatgaaggcacccaactctcagtcctg
cagagtctgaagacgatgtcacagctcacctgcttggagctactgaactgtgatctccag
cggataccaagtcatatcttcagcctgaagaacctgcaagaaatagacctcaaagggaac
aacctcaaaaccattgaggagatcatcagtttccagcaccttcccaagctctctaccctg
aagctgaagtacaacagtatcgcttacatcccagtccacgtcggagtgctggggaacctg
gagcaactccaccttggtcataacctcatcagccgcgtgcctgcgcagctgtttctgtgc
agcagactctatatgctagacctcagtcacaacaagctgtctgccattcccactgaaata
aaggacctgaagagactgcagctcctcaatgtgtccagcaataatattgaccatctccca
gaaggcctgttccagtgtaagaccctccagtccctgctgctaggccacaacaacctgtca
gtggtcccccaccaggtgagtgagctgaccaacctggtggtgttggacctgagggggaac
cagctggagagccttcccgcggagctggaggagtgccacagcctgatgcccagtggactg
ctggtagaggaggggctgctcaactctctgccgcccagcgtcaaggagggcttccagagg
cttgataaggagtacctggggaaaatggaggctgaaggagtggggaatgctctcaactgt
aaccccattatctgtaataaagcaggacatggagatacggcctgcggcctcatatactcc
atgtga
DBGET
integrated database retrieval system
