Coregonus clupeaformis (lake whitefish): 121534163
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Entry
121534163 CDS
T08357
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121534163
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
121534163
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
MAGP
EGF_3
cEGF
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
121534163
NCBI-ProteinID:
XP_041696619
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All DBs
Position
20:55540295..55617598
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AA seq
1362 aa
AA seq
DB search
MVMVPGAALVPGSLLPCLCTLLCLDLLFLPGLVEPSVPLEDFYPFGQDWGDSQTISQDDG
GSGLVEISVAFPFFGDRHSGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVD
NRRAGQVFYRESRDPSVLQRATADVKRYFSEFPEFTATWILISTWHKVTFFGGSDFTPVN
TFQLVLITNGELSFTIFQYHDITWTTGMHASSGGDLAGLGGIAAQAGFNAGDGKRYFNIP
GSRTGDVVDVEGTTNVGCPGRWVFRIDNAQVEVGGCNHSASVCPHLRPCLNGGRCIDDCI
TGNPSFTCSCLAGFTGRWCQIDVDECSSVPCQNGGTCSDQVNGFTCQCPPGFTGTVCQTD
IDECKDRPCLNGALCVQGVDNFTCVCERGYTGILCETDMDECVSQPCLNGGQCKDQVNGY
ACTCPVAFTGTHCETELVVVQVNSSSTPQTENQTVSCQREGCENHQICEYIGPGNYSCAC
IQGFYGDNCEEECLCQNGGVCVDGTCDCTSGFTGLYCQFEVTQTPCSNSRPCPDGGPCLE
YGGTYLCTCQTGVADVDHKDFYPPYVQPRSVCDSSPCLNGGYCYERDGGYTCDCKPGYRG
KHCEKVRLNTCASGPCRNGGSCKEEAGSFHCVCPYRFTGKHCEVGRPDPCSSNPCLNGGT
CFHYIGKYKCECSGAFSGRHCDISRGSAHSTADLDCGPPLQVKHAELQFSSTSPGSMALY
VCHPGYTPMPRATQSICGGQGAWSQPPVCQDVDECLSEPCKHGGTCEDQPGSYSCHCQQG
FMGQDCEIEKDRCESNPCLNGGVCRGYRKNHLCVCKEGFFGDHCQSLENPCVLQPCGNRG
LCHSNRRGNYCCACRVGHTGKDCERDLLPPSGLRVLLVEEDEVVLRWDLPDPSSQSLVSG
FAVTYAPLDLLDRGSGTRKTDFLDKKQSTYQLQGLVPGLLYNISTFSVKRNTNSNDISQP
AVALIRTRPRRADQLQVVNVSSSQVWLRWLVQASHHATVSQVRLSLVPWDGSGVRTALLN
TSTMEYAFSSLLPGQMYTVDVLTQSGIRPDELPSTSHSAGPLQVWTRPLPPQNLSLSHVT
SNSAQVTWDRHPRNLPDGFVVNVTRGLSTRSRFLPNGKLRTYTLRELSPGQHYHLALVAV
RNTGQEQIHSVPQHLAFTTLPMEERWGGRTRESQGTLAPSEPQDLGVAAERENSEEMPRY
TELIDGRGRITAKFTSLPRKTLRHRTKPEPPIQLERREETTNRISLALERREEEEGSRPE
SSRDCQSLPCLNGGTCAKGSDSYICDCAAGFKGRQCELFCQRLPHPCTRLYSETKSVPVW
VGEVCHYLYKRTYKVQQDVCYREICEPPLLPKKSPNRRSNIQ
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggtgcccggagctgccctggtacctggatccctactaccctgtctctgcacc
ctgctctgcctggatctgctgtttctccctgggctggtcgagccgtcggtgccactggag
gacttctacccctttggccaggactggggggattcccagacgatctcccaggacgatgga
ggctcaggcctggtggagatctctgtggcgttccccttcttcggtgacaggcactcggga
ctctacgtgaacaacaacggtctggtctcgttcctcagagaggtgtctcagttcacaccc
gtggcgtttcccatcgctggcgaccggagggttgtggcgccgttctgggctgacgtggac
aaccggcgggccgggcaggtcttctaccgggagagtagagacccatccgtccttcagagg
gccacggctgacgtcaaacggtacttctctgagttcccagagttcactgcaacatggatc
ctcatctcaacgtggcacaaagtcaccttctttgggggaagtgacttcacaccggtgaat
acgttccaattggtgctgatcaccaacggagagctatccttcaccatcttccagtatcat
gacatcacctggaccacaggcatgcatgccagcagtggaggggacctggcagggctagga
ggcatcgctgcacaggcaggttttaacgctggcgacgggaaacgatacttcaacatcccc
gggtctcgtactggtgacgtggtggacgtggagggaaccaccaacgtgggttgccccggg
agatgggtgttccgcatcgacaacgcccaggtggaggtgggcggctgcaaccactcagcg
tctgtgtgtccacaccttcgaccctgtctgaatggaggtcgctgtattgatgactgcatc
accggcaacccttctttcacctgctcctgtcttgctggattcaccggacggtggtgccag
atagatgtagatgagtgttcgtccgtcccctgtcagaatggaggtacctgctcagaccag
gttaacgggttcacctgccagtgtccacctgggtttacagggacagtctgccaaacagac
attgacgagtgtaaagacagaccctgcctcaacggagcgctgtgtgtacaaggcgtcgac
aatttcacctgcgtgtgtgagcggggctacactgggattctgtgtgagacagacatggat
gagtgtgtttcccagccctgcctgaatggaggacagtgtaaagaccaggtgaatggttac
gcctgcacctgtcctgttgccttcaccgggacacactgtgagacagagttggtggtggtc
caggtgaattcatcatcgactcctcaaactgaaaatcaaacagtgtcttgtcagagggaa
ggctgtgagaaccatcagatctgtgaatacatcggcccagggaactacagctgtgcctgc
atccagggcttctatggtgacaactgtgaagaagagtgtctgtgccagaatgggggggtc
tgtgtggacgggacctgtgactgcacctcgggcttcactggactctactgtcagtttgag
gtgacccagacgccatgcagcaacagcaggccgtgtcctgacggaggaccctgtctggag
tatggaggaacctacctgtgtacctgtcagacaggtgtggcagacgttgaccacaaggac
ttttatcctccctatgtacagccgcgatcggtctgtgattcgtctccgtgtctgaatggg
ggttactgctatgagagggatggaggctacacctgcgactgcaagcctggatacagaggg
aagcactgtgagaaagtcagactcaacacctgtgcctctggtccgtgtcgtaacggaggt
tcctgtaaagaggaggcagggagcttccactgtgtctgtccatacaggttcactggcaaa
cactgtgaagtggggaggccagacccatgctcctccaacccctgtttgaacgggggaaca
tgtttccactacattgggaagtacaagtgtgagtgttctggggccttcagcgggagacac
tgtgacatcagcaggggatcagcacactccacagcagacctggactgtggtccccccctg
caggtgaagcatgcagagctccagttctcctccacgtctccaggctccatggcgctgtac
gtgtgccacccaggatacacccccatgcccagggccacccagagcatctgtggggggcag
ggcgcctggagccaaccccctgtctgtcaggatgtggatgagtgtctgtcggagccctgt
aaacacggcggaacatgtgaggatcagcctggatcctactcctgccactgccaacagggc
ttcatgggacaagactgtgagattgagaaggacaggtgtgagtccaacccctgtctgaac
ggcggtgtgtgtcgaggctacaggaagaaccacctgtgtgtctgtaaagaagggttcttt
ggggaccactgccagtcactggagaatccctgtgtactgcagccgtgtgggaacagaggc
ctctgccatagcaacaggagagggaactactgctgtgcatgcagagtgggacacacaggc
aaggactgtgagagagacctgttgcctccctctggtctgcgtgtcctactggtggaggag
gatgaggtggtgctgcgctgggacctgccggacccctcctctcagagcctggtcagtggc
ttcgctgtgacctacgcccctctggatctcctggaccgcggcagtggaaccaggaagacg
gacttccttgacaagaagcagtccacctatcagctgcagggcctggtgcctggcctgctc
tacaacatctcgaccttctctgtgaaacgaaacaccaacagcaacgatatcagccagcca
gccgtcgcactcatacgcaccaggccgcggcgggctgatcagctgcaggtagttaacgta
tcgtcctcccaggtatggctgaggtggctggttcaggcttctcatcatgctactgtcagc
caggtgcgcctctccctggtcccctgggacggtagtggagttcgcaccgccctgctcaac
accagcaccatggaatatgccttcagctctctgctccctggccagatgtacacagtggat
gttctaactcagagcgggatcagaccagacgagttaccctccaccagtcactcagctggg
ccgctgcaagtctggacccgacccctcccccctcagaacctgtctctgtcccatgtgacc
tccaactctgcccaggtgacgtgggaccgccaccccaggaacctgccagacggcttcgtg
gtcaatgtgacgcgaggcctgagcacccggagtcgcttcctacccaatgggaaactgcgg
acgtataccctgagagagctttccccggggcagcactaccacctagccctcgtggctgtt
aggaacacaggacaggaacagatccacagtgtaccacaacacctggccttcaccacgttg
ccgatggaggagcgatggggagggaggacgagggagagccagggaaccctagccccgtct
gaaccccaggacctgggggtggctgcagagagagagaactctgaagagatgcccagatac
acagaactgattgatggaagggggaggataactgctaagttcactagcctgcccaggaag
accctcagacaccgcactaagcctgagcctcctattcagttagagaggagggaggagaca
acgaatagaatcagccttgcactagagaggagagaggaagaggaaggttccaggcctgag
tcgtcccgggactgccagagtctgccttgcctgaacgggggtacgtgtgcgaaggggagc
gactcatacatctgcgattgcgcagccgggttcaagggcaggcagtgtgagctgttctgc
caacgattgccccacccgtgtacccgcctctactctgaaacaaagagtgtgcccgtctgg
gtgggcgaagtctgccattacctgtataaaaggacctataaagtgcagcaggatgtttgc
tatcgagagatctgtgaaccaccgctgcttcccaagaaaagccccaacagaagaagcaac
atacaataa
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