Coregonus clupeaformis (lake whitefish): 121534166
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Entry
121534166 CDS
T08357
Name
(RefSeq) ras-related protein Rab-6B isoform X1
KO
K07894
Ras-related protein Rab-6B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121534166
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121534166
04031 GTP-binding proteins [BR:
cclu04031
]
121534166
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab GTPases
121534166
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121534166
GTP-binding proteins [BR:
cclu04031
]
Small (monomeric) G-proteins
Rab Family
Rab6/41 [OT]
121534166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
FeoB_N
SRPRB
Septin
TetR_C_16
Motif
Other DBs
NCBI-GeneID:
121534166
NCBI-ProteinID:
XP_041696628
LinkDB
All DBs
Position
20:55778610..55921938
Genome browser
AA seq
215 aa
AA seq
DB search
MSVGSDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
TVCLSDPQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRT
ERGSDVIIMLVGNKTDLGDKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAA
LPGMESMQETSKEGMIDIKLDKPQEPPTTEGGCSC
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgggtagtgactttgggaaccccttaagaaaattcaaactggtctttctcggg
gagcaaagcgttggcaagacgtctctgatcacgaggttcatgtatgacagctttgacaac
acatatcaggccacaatcggaatagacttcctttcaaaaacgatgtacttggaagaccga
acggtgtgtctctctgatccccaggtgaggttgcagctgtgggacacggcaggacaggag
cgcttcaggagcctcataccctcctacatacgagactctactgtggccgtggtggtgtat
gatattacaaatgtgaactccttccagcaaacttccaaatggatcgatgatgtcagaaca
gagagaggaagtgatgtcattatcatgctcgtcggcaacaaaacagacttgggagataag
aggcagatcaccatagaggaaggagaacagcgggccaaggagctcagtgtcatgtttatt
gagaccagcgccaagacaggctacaacgtcaaacagctgtttcggcgcgtggcagctgcc
cttcctgggatggagagcatgcaggagacaagcaaagagggaatgattgacatcaagctg
gacaaaccacaggagcctccaaccactgaaggcgggtgctcctgttaa
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